Amazon HealthOmics
AWS HealthOmics is a purpose-built service for healthcare and life sciences organizations that helps store, query, and analyze genomic, transcriptomic, and other omics data to generate insights and accelerate scientific discoveries and improve healthcare.
APIs
AWS HealthOmics API
The AWS HealthOmics API provides programmatic access to manage omics storage, workflows, run groups, annotation stores, and variant stores for genomics and other omics data anal...
Capabilities
Features
Purpose-built storage for genomic, transcriptomic, and other omics data with automatic optimization.
Run industry-standard bioinformatics tools and pipelines using WDL and Nextflow workflow definitions.
Store and query genomic annotation data from sources like ClinVar, Ensembl, and custom datasets.
Store and query genomic variant data in VCF and other standard bioinformatics formats.
Efficiently store and retrieve genomic sequence read sets in FASTQ, BAM, and CRAM formats.
Store and access reference genome files for alignment and analysis workflows.
Fully managed compute infrastructure for running bioinformatics workflows at scale.
Use Cases
Store, analyze, and interpret whole genome sequencing data for research and clinical applications.
Run standard variant calling workflows on genomic data to identify genetic variants.
Analyze genomic data to understand drug response and develop personalized medicine approaches.
Process and analyze large-scale genomic datasets across patient populations for research.
Support clinical genomics workflows for diagnosis and treatment of genetic disorders.
Integrations
Import and export omics data using S3 as the primary data source and destination.
Control access to HealthOmics resources using IAM roles and policies.
Monitor HealthOmics workflows and storage operations through CloudWatch metrics.
Govern and secure genomic data lake access using Lake Formation permissions.
Query genomic annotation and variant data stored in HealthOmics using Athena.
Supplement HealthOmics workflows with custom compute jobs using AWS Batch.