Amazon HealthOmics

Amazon HealthOmics Run Group API

The Run Group API from Amazon HealthOmics — 2 operation(s) for run group.

GitHub OpenAPI

Operations 5

POST /runGroup Amazon HealthOmics Create Run Group #
GET /runGroup Amazon HealthOmics List Run Groups #
DELETE /runGroup/{id} Amazon HealthOmics Delete Run Group #
GET /runGroup/{id} Amazon HealthOmics Get Run Group #
POST /runGroup/{id} Amazon HealthOmics Update Run Group #

Documentation

📖
Documentation
https://docs.aws.amazon.com/omics/latest/api/Welcome.html
📖
GettingStarted
https://aws.amazon.com/healthomics/getting-started/
📖
APIReference
https://docs.aws.amazon.com/omics/latest/api/Welcome.html
📖
Authentication
https://docs.aws.amazon.com/omics/latest/api/CommonParameters.html

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/openapi/amazon-healthomics-run-group-api-openapi.yml

Schemas & Data

📊
JSONSchema
https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/json-schema/healthomics-abort-multipart-read-set-upload-request-schema.json

Other Resources

🔗
Pricing
https://aws.amazon.com/healthomics/pricing/
🔗
FAQ
https://aws.amazon.com/healthomics/faqs/
🔗
JSONLD
https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/json-ld/amazon-healthomics-context.jsonld

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OpenAPI Specification

amazon-healthomics-run-group-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  version: '2022-11-28'
  x-release: v4
  title: Amazon Omics Run Group API
  description: This is the AWS HealthOmics API Reference. For an introduction to the service, see What is AWS HealthOmics? in the AWS HealthOmics User Guide.
  x-logo:
    url: https://twitter.com/awscloud/profile_image?size=original
    backgroundColor: '#FFFFFF'
  termsOfService: https://aws.amazon.com/service-terms/
  contact:
    name: Mike Ralphson
    email: mike.ralphson@gmail.com
    url: https://github.com/mermade/aws2openapi
    x-twitter: PermittedSoc
  license:
    name: Apache 2.0 License
    url: http://www.apache.org/licenses/
  x-providerName: amazonaws.com
  x-serviceName: omics
  x-aws-signingName: omics
  x-origin:
  - contentType: application/json
    url: https://raw.githubusercontent.com/aws/aws-sdk-js/master/apis/omics-2022-11-28.normal.json
    converter:
      url: https://github.com/mermade/aws2openapi
      version: 1.0.0
    x-apisguru-driver: external
  x-apiClientRegistration:
    url: https://portal.aws.amazon.com/gp/aws/developer/registration/index.html?nc2=h_ct
  x-apisguru-categories:
  - cloud
  x-preferred: true
servers:
- url: http://omics.{region}.amazonaws.com
  variables:
    region:
      description: The AWS region
      enum:
      - us-east-1
      - us-east-2
      - us-west-1
      - us-west-2
      - us-gov-west-1
      - us-gov-east-1
      - ca-central-1
      - eu-north-1
      - eu-west-1
      - eu-west-2
      - eu-west-3
      - eu-central-1
      - eu-south-1
      - af-south-1
      - ap-northeast-1
      - ap-northeast-2
      - ap-northeast-3
      - ap-southeast-1
      - ap-southeast-2
      - ap-east-1
      - ap-south-1
      - sa-east-1
      - me-south-1
      default: us-east-1
  description: The Amazon Omics multi-region endpoint
- url: https://omics.{region}.amazonaws.com
  variables:
    region:
      description: The AWS region
      enum:
      - us-east-1
      - us-east-2
      - us-west-1
      - us-west-2
      - us-gov-west-1
      - us-gov-east-1
      - ca-central-1
      - eu-north-1
      - eu-west-1
      - eu-west-2
      - eu-west-3
      - eu-central-1
      - eu-south-1
      - af-south-1
      - ap-northeast-1
      - ap-northeast-2
      - ap-northeast-3
      - ap-southeast-1
      - ap-southeast-2
      - ap-east-1
      - ap-south-1
      - sa-east-1
      - me-south-1
      default: us-east-1
  description: The Amazon Omics multi-region endpoint
- url: http://omics.{region}.amazonaws.com.cn
  variables:
    region:
      description: The AWS region
      enum:
      - cn-north-1
      - cn-northwest-1
      default: cn-north-1
  description: The Amazon Omics endpoint for China (Beijing) and China (Ningxia)
- url: https://omics.{region}.amazonaws.com.cn
  variables:
    region:
      description: The AWS region
      enum:
      - cn-north-1
      - cn-northwest-1
      default: cn-north-1
  description: The Amazon Omics endpoint for China (Beijing) and China (Ningxia)
security:
- hmac: []
tags:
- name: Run Group
paths:
  /runGroup:
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
    post:
      operationId: CreateRunGroup
      description: Creates a run group.
      responses:
        '201':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/CreateRunGroupResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters: []
      requestBody:
        required: true
        content:
          application/json:
            schema:
              type: object
              required:
              - requestId
              properties:
                name:
                  description: A name for the group.
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 128
                maxCpus:
                  description: The maximum number of CPUs to use in the group.
                  type: integer
                  minimum: 1
                  maximum: 100000
                maxRuns:
                  description: The maximum number of concurrent runs for the group.
                  type: integer
                  minimum: 1
                  maximum: 100000
                maxDuration:
                  description: A maximum run time for the group in minutes.
                  type: integer
                  minimum: 1
                  maximum: 100000
                tags:
                  description: Tags for the group.
                  type: object
                  additionalProperties:
                    $ref: '#/components/schemas/TagValue'
                requestId:
                  description: To ensure that requests don't run multiple times, specify a unique ID for each request.
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 128
                maxGpus:
                  description: ' The maximum GPUs that can be used by a run group. '
                  type: integer
                  minimum: 1
                  maximum: 100000
      summary: Amazon HealthOmics Create Run Group
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
      tags:
      - Run Group
    get:
      operationId: ListRunGroups
      description: Retrieves a list of run groups.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ListRunGroupsResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: name
        in: query
        required: false
        description: The run groups' name.
        schema:
          type: string
          pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
          minLength: 1
          maxLength: 128
      - name: startingToken
        in: query
        required: false
        description: Specify the pagination token from a previous request to retrieve the next page of results.
        schema:
          type: string
          pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
          minLength: 1
          maxLength: 128
      - name: maxResults
        in: query
        required: false
        description: The maximum number of run groups to return in one page of results.
        schema:
          type: integer
          minimum: 1
          maximum: 100
      summary: Amazon HealthOmics List Run Groups
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
      tags:
      - Run Group
  /runGroup/{id}:
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
    delete:
      operationId: DeleteRunGroup
      description: Deletes a workflow run group.
      responses:
        '202':
          description: Success
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: id
        in: path
        required: true
        description: The run group's ID.
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 1
          maxLength: 18
      summary: Amazon HealthOmics Delete Run Group
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
      tags:
      - Run Group
    get:
      operationId: GetRunGroup
      description: Gets information about a workflow run group.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/GetRunGroupResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: id
        in: path
        required: true
        description: The group's ID.
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 1
          maxLength: 18
      summary: Amazon HealthOmics Get Run Group
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
      tags:
      - Run Group
    post:
      operationId: UpdateRunGroup
      description: Updates a run group.
      responses:
        '202':
          description: Success
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: id
        in: path
        required: true
        description: The group's ID.
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 1
          maxLength: 18
      requestBody:
        required: true
        content:
          application/json:
            schema:
              type: object
              properties:
                name:
                  description: A name for the group.
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 128
                maxCpus:
                  description: The maximum number of CPUs to use.
                  type: integer
                  minimum: 1
                  maximum: 100000
                maxRuns:
                  description: The maximum number of concurrent runs for the group.
                  type: integer
                  minimum: 1
                  maximum: 100000
                maxDuration:
                  description: A maximum run time for the group in minutes.
                  type: integer
                  minimum: 1
                  maximum: 100000
                maxGpus:
                  description: ' The maximum GPUs that can be used by a run group. '
                  type: integer
                  minimum: 1
                  maximum: 100000
      summary: Amazon HealthOmics Update Run Group
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
      tags:
      - Run Group
components:
  schemas:
    RunGroupListToken:
      type: string
      pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
      minLength: 1
      maxLength: 128
    ServiceQuotaExceededException: {}
    ConflictException: {}
    RunGroupListItemMaxCpusInteger:
      type: integer
      minimum: 1
      maximum: 100000
    InternalServerException: {}
    RunGroupList:
      type: array
      items:
        $ref: '#/components/schemas/RunGroupListItem'
    ValidationException: {}
    RunGroupListItemMaxGpusInteger:
      type: integer
      minimum: 1
      maximum: 100000
    RunGroupListItemMaxRunsInteger:
      type: integer
      minimum: 1
      maximum: 100000
    RunGroupId:
      type: string
      pattern: '[0-9]+'
      minLength: 1
      maxLength: 18
    GetRunGroupResponseMaxCpusInteger:
      type: integer
      minimum: 1
      maximum: 100000
    GetRunGroupResponse:
      type: object
      properties:
        arn:
          allOf:
          - $ref: '#/components/schemas/RunGroupArn'
          - description: The group's ARN.
        id:
          allOf:
          - $ref: '#/components/schemas/RunGroupId'
          - description: The group's ID.
        name:
          allOf:
          - $ref: '#/components/schemas/RunGroupName'
          - description: The group's name.
        maxCpus:
          allOf:
          - $ref: '#/components/schemas/GetRunGroupResponseMaxCpusInteger'
          - description: The group's maximum number of CPUs to use.
        maxRuns:
          allOf:
          - $ref: '#/components/schemas/GetRunGroupResponseMaxRunsInteger'
          - description: The maximum number of concurrent runs for the group.
        maxDuration:
          allOf:
          - $ref: '#/components/schemas/GetRunGroupResponseMaxDurationInteger'
          - description: The group's maximum run time in minutes.
        creationTime:
          allOf:
          - $ref: '#/components/schemas/RunGroupTimestamp'
          - description: When the group was created.
        tags:
          allOf:
          - $ref: '#/components/schemas/TagMap'
          - description: The group's tags.
        maxGpus:
          allOf:
          - $ref: '#/components/schemas/GetRunGroupResponseMaxGpusInteger'
          - description: ' The maximum GPUs that can be used by a run group. '
    GetRunGroupResponseMaxDurationInteger:
      type: integer
      minimum: 1
      maximum: 100000
    GetRunGroupResponseMaxGpusInteger:
      type: integer
      minimum: 1
      maximum: 100000
    TagValue:
      type: string
      minLength: 0
      maxLength: 256
    RunGroupArn:
      type: string
      pattern: arn:.+
      minLength: 1
      maxLength: 128
    RunGroupListItem:
      type: object
      properties:
        arn:
          allOf:
          - $ref: '#/components/schemas/RunGroupArn'
          - description: The group's ARN.
        id:
          allOf:
          - $ref: '#/components/schemas/RunGroupId'
          - description: The group's ID.
        name:
          allOf:
          - $ref: '#/components/schemas/RunGroupName'
          - description: The group's name.
        maxCpus:
          allOf:
          - $ref: '#/components/schemas/RunGroupListItemMaxCpusInteger'
          - description: The group's maximum CPU count setting.
        maxRuns:
          allOf:
          - $ref: '#/components/schemas/RunGroupListItemMaxRunsInteger'
          - description: The group's maximum concurrent run setting.
        maxDuration:
          allOf:
          - $ref: '#/components/schemas/RunGroupListItemMaxDurationInteger'
          - description: The group's maximum duration setting in minutes.
        creationTime:
          allOf:
          - $ref: '#/components/schemas/RunGroupTimestamp'
          - description: When the group was created.
        maxGpus:
          allOf:
          - $ref: '#/components/schemas/RunGroupListItemMaxGpusInteger'
          - description: ' The maximum GPUs that can be used by a run group. '
      description: A run group.
    ThrottlingException: {}
    ResourceNotFoundException: {}
    RunGroupName:
      type: string
      pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
      minLength: 1
      maxLength: 128
    RunGroupListItemMaxDurationInteger:
      type: integer
      minimum: 1
      maximum: 100000
    AccessDeniedException: {}
    ListRunGroupsResponse:
      type: object
      properties:
        items:
          allOf:
          - $ref: '#/components/schemas/RunGroupList'
          - description: A list of groups.
        nextToken:
          allOf:
          - $ref: '#/components/schemas/RunGroupListToken'
          - description: A pagination token that's included if more results are available.
    GetRunGroupResponseMaxRunsInteger:
      type: integer
      minimum: 1
      maximum: 100000
    RunGroupTimestamp:
      type: string
      format: date-time
    RequestTimeoutException: {}
    TagMap:
      type: object
      additionalProperties:
        $ref: '#/components/schemas/TagValue'
    CreateRunGroupResponse:
      type: object
      properties:
        arn:
          allOf:
          - $ref: '#/components/schemas/RunGroupArn'
          - description: The group's ARN.
        id:
          allOf:
          - $ref: '#/components/schemas/RunGroupId'
          - description: The group's ID.
        tags:
          allOf:
          - $ref: '#/components/schemas/TagMap'
          - description: Tags for the run group.
  parameters:
    X-Amz-Signature:
      name: X-Amz-Signature
      in: header
      schema:
        type: string
      required: false
    X-Amz-Security-Token:
      name: X-Amz-Security-Token
      in: header
      schema:
        type: string
      required: false
    X-Amz-Algorithm:
      name: X-Amz-Algorithm
      in: header
      schema:
        type: string
      required: false
    X-Amz-SignedHeaders:
      name: X-Amz-SignedHeaders
      in: header
      schema:
        type: string
      required: false
    X-Amz-Content-Sha256:
      name: X-Amz-Content-Sha256
      in: header
      schema:
        type: string
      required: false
    X-Amz-Date:
      name: X-Amz-Date
      in: header
      schema:
        type: string
      required: false
    X-Amz-Credential:
      name: X-Amz-Credential
      in: header
      schema:
        type: string
      required: false
  securitySchemes:
    hmac:
      type: apiKey
      name: Authorization
      in: header
      description: Amazon Signature authorization v4
      x-amazon-apigateway-authtype: awsSigv4
externalDocs:
  description: Amazon Web Services documentation
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