Healthomics Import Read Set Source Item Structure

A source for an import read set job.

Type: object Properties: 11 Required: 5

BioinformaticsGenomicsHealthcareLife SciencesCloud Computing

ImportReadSetSourceItem is a JSON Structure definition published by Amazon HealthOmics, describing 11 properties, of which 5 are required. It conforms to the https://json-structure.org/meta/core/v0/# meta-schema.

Properties

sourceFiles sourceFileType status statusMessage subjectId sampleId generatedFrom referenceArn name description tags

Meta-schema: https://json-structure.org/meta/core/v0/#

JSON Structure

{
  "$schema": "https://json-structure.org/meta/core/v0/#",
  "$id": "https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/json-schema/healthomics-import-read-set-source-item-schema.json",
  "name": "ImportReadSetSourceItem",
  "type": "object",
  "required": [
    "sourceFiles",
    "sourceFileType",
    "status",
    "subjectId",
    "sampleId"
  ],
  "properties": {
    "sourceFiles": {
      "allOf": [
        {
          "$ref": "#/components/schemas/SourceFiles"
        },
        {
          "description": "The source files' location in Amazon S3."
        }
      ]
    },
    "sourceFileType": {
      "allOf": [
        {
          "$ref": "#/components/schemas/FileType"
        },
        {
          "description": "The source's file type."
        }
      ]
    },
    "status": {
      "allOf": [
        {
          "$ref": "#/components/schemas/ReadSetImportJobItemStatus"
        },
        {
          "description": "The source's status."
        }
      ]
    },
    "statusMessage": {
      "allOf": [
        {
          "$ref": "#/components/schemas/JobStatusMessage"
        },
        {
          "description": "The source's status message."
        }
      ]
    },
    "subjectId": {
      "allOf": [
        {
          "$ref": "#/components/schemas/SubjectId"
        },
        {
          "description": "The source's subject ID."
        }
      ]
    },
    "sampleId": {
      "allOf": [
        {
          "$ref": "#/components/schemas/SampleId"
        },
        {
          "description": "The source's sample ID."
        }
      ]
    },
    "generatedFrom": {
      "allOf": [
        {
          "$ref": "#/components/schemas/GeneratedFrom"
        },
        {
          "description": "Where the source originated."
        }
      ]
    },
    "referenceArn": {
      "allOf": [
        {
          "$ref": "#/components/schemas/ReferenceArn"
        },
        {
          "description": "The source's genome reference ARN."
        }
      ]
    },
    "name": {
      "allOf": [
        {
          "$ref": "#/components/schemas/ReadSetName"
        },
        {
          "description": "The source's name."
        }
      ]
    },
    "description": {
      "allOf": [
        {
          "$ref": "#/components/schemas/ReadSetDescription"
        },
        {
          "description": "The source's description."
        }
      ]
    },
    "tags": {
      "allOf": [
        {
          "$ref": "#/components/schemas/TagMap"
        },
        {
          "description": "The source's tags."
        }
      ]
    }
  },
  "description": "A source for an import read set job."
}