Biodock

Biodock is an AI platform that makes deep learning easy to train, run, and interpret on biological and microscopy images, dramatically accelerating R&D image analysis. Researchers upload microscopy images, label and train fully-automated deep AI models in a visual labeler (no code required), and run those models across large datasets to segment, classify, and quantify objects such as cells - producing results comparable to flow cytometry along with downloadable object-level and aggregate data. Biodock is used by academic labs and Fortune 500 biopharma and life-science organizations, and is SOC 2 Type II and ISO 27001 certified. Beyond the visual app, Biodock exposes a public REST API (beta) for uploading files to the Biodock Filesystem, submitting analysis jobs against published pipelines, tracking job progress, and downloading results and segmentation masks - so analysis can be scripted and integrated into internal tools and imaging pipelines.

Biodock publishes 4 APIs on the APIs.io network, including Analysis Jobs API, Auth API, Files API, and 1 more. Tagged areas include Company, Artificial Intelligence, Machine Learning, Image Analysis, and Microscopy.

Biodock’s developer surface includes documentation, signup flow, engineering blog, support, and 14 more developer resources.

🌐 Visit website 📡 Source on GitHub

47.1/100 developing ▬ flat Agent 22/100 agent aware Full breakdown ↓
scored 2026-07-27 · rubric v0.5

AccessSelf serve

4 APIs

CompanyArtificial IntelligenceMachine LearningImage AnalysisMicroscopyLife SciencesBiotechnologyComputer VisionCell AnalysisResearch

Kin Score

Kin Score How this is scored →
scored 2026-07-27 · rubric v0.5

Composite quality — 47.1/100 · developing

Contract Quality 14.4 / 25

Developer Ergonomics 6.1 / 20

Commercial Clarity 10.0 / 20

Operational Transparency 3.4 / 13

Governance 0.0 / 12

Discoverability 10.0 / 10

Agent readiness — 22/100 · agent aware

Machine-Readable Contract 18 / 18

Agentic Access Contract 0 / 15

MCP Server 0 / 12

Machine-Readable Auth 0 / 10

Idempotency 0 / 9

Stable Error Semantics 0 / 8

Request/Response Examples 0 / 7

Rate-Limit Signaling 0 / 7

Typed Event Surface 0 / 6

Agent Skills 5 / 5

Well-Known Catalog 0 / 4

Consent & Bot Identity 0 / 3

Improve this rating by publishing the missing artifacts — every area above can be raised, and the full rubric is at apis.io/rating/. This rating is computed from github.com/api-evangelist/biodock: open an issue to ask a question, or submit a pull request to add artifacts. Want it done for you? Prioritized profiling — $2,500 →

APIs 4

Individual APIs this provider publishes, each with its own machine-readable definition.

Get Started 3

Portal, sign-up, and the first successful call

DeveloperPortal

DeveloperPortal

SignUp

SignUp

Login

Documentation 1

Reference material describing how the API behaves

Documentation

Documentation

Agent Surfaces 2

MCP servers, agent skills, and machine-readable catalogs

LLMsTxt

LLMsTxt

AgentSkill

AgentSkill

Design & Contract 2

Pagination, idempotency, versioning, errors, and events

Lifecycle

Lifecycle

Conformance

Conformance

Access & Security 5

Authentication, authorization, and security posture

Security

Security

Compliance

Compliance

TrustCenter

TrustCenter

VulnerabilityDisclosure

VulnerabilityDisclosure

DomainSecurity

DomainSecurity

Operate 2

Status, limits, changes, and where to get help

StatusPage

StatusPage

Support

Support

Commercial 2

Pricing, plans, and the legal terms of use

TermsOfService

TermsOfService

PrivacyPolicy

PrivacyPolicy

Company 1

The organization behind the API

Blog

Blog

Source (apis.yml)

aid: biodock
name: Biodock
description: Biodock is an AI platform that makes deep learning easy to train, run, and interpret on biological and microscopy
  images, dramatically accelerating R&D image analysis. Researchers upload microscopy images, label and train fully-automated
  deep AI models in a visual labeler (no code required), and run those models across large datasets to segment, classify,
  and quantify objects such as cells - producing results comparable to flow cytometry along with downloadable object-level
  and aggregate data. Biodock is used by academic labs and Fortune 500 biopharma and life-science organizations, and is SOC
  2 Type II and ISO 27001 certified. Beyond the visual app, Biodock exposes a public REST API (beta) for uploading files to
  the Biodock Filesystem, submitting analysis jobs against published pipelines, tracking job progress, and downloading results
  and segmentation masks - so analysis can be scripted and integrated into internal tools and imaging pipelines.
url: https://raw.githubusercontent.com/api-evangelist/biodock/refs/heads/main/apis.yml
x-type: company
x-source: vc-portfolio
x-backed-by:
- a16z
x-tier: stub
x-tier-reason: portfolio-lead
accessModel:
  pricing: unknown
  onboarding: self-serve
  trial: false
  try_now: false
  public: false
  label: Self-serve signup
  confidence: medium
  source:
  - authentication
  generated: '2026-07-22'
  method: derived
specificationVersion: '0.20'
created: '2026-07-17'
modified: '2026-07-18'
image: https://cdn.prod.website-files.com/63213d26df394911486f698e/637bb41c1cac3a4ded2e9f23_SEOImage.jpg
tags:
- Company
- Artificial Intelligence
- Machine Learning
- Image Analysis
- Microscopy
- Life Sciences
- Biotechnology
- Computer Vision
- Cell Analysis
- Research
apis:
- aid: biodock:biodock-analysis-jobs-api
  name: Biodock Analysis Jobs API
  description: Submitting, tracking, and downloading analysis jobs
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Analysis Jobs
  properties:
  - type: OpenAPI
    url: openapi/biodock-analysis-jobs-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
- aid: biodock:biodock-auth-api
  name: Biodock Auth API
  description: API key verification
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Auth
  properties:
  - type: OpenAPI
    url: openapi/biodock-auth-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
- aid: biodock:biodock-files-api
  name: Biodock Files API
  description: Uploading and listing Biodock Filesystem items
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Files
  properties:
  - type: OpenAPI
    url: openapi/biodock-files-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
- aid: biodock:biodock-pipelines-api
  name: Biodock Pipelines API
  description: Listing published analysis pipelines
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Pipelines
  properties:
  - type: OpenAPI
    url: openapi/biodock-pipelines-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
common:
- type: DeveloperPortal
  url: https://docs.biodock.ai/
- type: Documentation
  url: https://docs.biodock.ai/
- type: SignUp
  url: https://app.biodock.ai/signup
- type: Login
  url: https://app.biodock.ai/
- type: Blog
  url: https://blog.biodock.ai/
- type: StatusPage
  url: https://biodock.statuspage.io/
- type: Support
  url: https://www.biodock.ai/contact
- type: TermsOfService
  url: https://www.biodock.ai/termsprivacy
- type: PrivacyPolicy
  url: https://www.biodock.ai/termsprivacy
- type: Security
  url: https://www.biodock.ai/security
- type: Compliance
  url: https://www.biodock.ai/security
- type: TrustCenter
  url: https://www.biodock.ai/security
- type: LLMsTxt
  url: llms/biodock-llms.txt
- type: Lifecycle
  url: lifecycle/biodock-lifecycle.yml
- type: Conformance
  url: conformance/biodock-conformance.yml
- type: VulnerabilityDisclosure
  url: security/biodock-vulnerability-disclosure.yml
- type: DomainSecurity
  url: security/biodock-domain-security.yml
- type: AgentSkill
  url: skills/_index.yml
maintainers:
- FN: Kin Lane
  email: kin@apievangelist.com
- FN: APIs.json
  email: info@apis.io
x-enrichment:
  date: '2026-07-19'
  status: backfilled
  pass: local-v1
  note: backfilled from .gitignore signal + verified work evidence

Biodock

Kin Score

APIs 4

Biodock Analysis Jobs API

Biodock Auth API

Biodock Files API

Biodock Pipelines API

Security Posture 4

Biodock Authentication

Biodock Domain Security

Biodock Vulnerability Disclosure

Biodock Trust Center

Resources