AgroDesign Studios

aid: agrodesignstudio
name: AgroDesign Studios
description: 'AgroDesign Studios (株式会社アグロデザイン・スタジオ) is a Japanese structural-biology startup founded 30 March 2018 by CEO
  Yuki Nishigaya, based in the University of Tokyo Kashiwa-II campus industry-academia building in Kashiwa, Chiba. It applies
  protein and nucleic-acid 3D structure information to the discovery of molecular-targeted, environmentally safer crop-protection
  chemicals. Its commercial surface is contract research rather than software: the AgroBox® service brand sells X-ray crystallography,
  cryo-EM, fragment screening and structure-based drug design (SBDD) engagements, and AgroDesign.SHOP sells lab-automation
  robots, cultivation kits and experimental materials. The company publishes no first-party API, SDK or developer program;
  its only machine-callable agent surface is the Wix platform Site MCP endpoint served on each of its two Wix-hosted sites.'
image: https://static.wixstatic.com/media/a7776e_4c1c9094741c45dd9391de482e580aeb~mv2.jpg/v1/fill/w_446,h_234,al_c/a7776e_4c1c9094741c45dd9391de482e580aeb~mv2.jpg
url: https://raw.githubusercontent.com/api-evangelist/agrodesignstudio/refs/heads/main/apis.yml
x-type: company
x-source: harvest:secondary-market
position: Producing
specificationVersion: '0.20'
created: '2026-09-13'
modified: '2026-09-13'
tags:
- Agriculture
- AgTech
- Biotechnology
- Life Sciences
- Structural Biology
- Drug Discovery
- Crop Protection
- Contract Research
- Laboratory Automation
- Japan
- MCP
- Company
apis:
- name: AgroBox Site MCP
  description: A live, unauthenticated remote Model Context Protocol endpoint served at the AgroBox structural-biology service
    site. The server is the Wix "Site Visitor Assistant" — a PLATFORM-AUTHORED MCP surface generated by the Wix site builder,
    not written by AgroDesign Studios. It exposes nine generic Wix tools for searching the public site, fetching business
    details, and invoking Wix site/commerce APIs on behalf of an anonymous visitor. It is a real agent surface on a host the
    company controls; it is not a first-party API for the company's protein-structure-analysis service.
  humanURL: https://www.agrobox.jp/
  image: https://static.wixstatic.com/media/a7776e_4c1c9094741c45dd9391de482e580aeb~mv2.jpg/v1/fill/w_446,h_234,al_c/a7776e_4c1c9094741c45dd9391de482e580aeb~mv2.jpg
  baseURL: https://www.agrobox.jp/_api/mcp
  tags:
  - MCP
  - Structural Biology
  - Contract Research
  properties:
  - type: MCPServer
    url: mcp/agrodesignstudio-mcp.yml
  - type: LLMsTxt
    url: llms/agrodesignstudio-llms.txt
- name: AgroDesign.SHOP Site MCP
  description: The second live, unauthenticated remote MCP endpoint, served at the AgroDesign.SHOP storefront where the company
    sells lab-automation robot arms (as a UFACTORY xArm authorized reseller), Arabidopsis cultivation kits, seeds and experimental
    materials. Same Wix platform-authored "Site Visitor Assistant" server and same nine tools; because this host runs Wix
    Stores, the visitor-scoped CallWixSiteAPI tool can start a purchase.
  humanURL: https://www.agrodesign.shop/
  image: https://static.wixstatic.com/media/a7776e_9fe0f1d57990465ba2d94a8e30f9341a~mv2.png/v1/fill/w_1000,h_997,al_c/a7776e_9fe0f1d57990465ba2d94a8e30f9341a~mv2.png
  baseURL: https://www.agrodesign.shop/_api/mcp
  tags:
  - MCP
  - E-Commerce
  - Laboratory Automation
  tags_raw:
  - MCP
  - eCommerce
  - Laboratory Automation
  properties:
  - type: MCPServer
    url: mcp/agrodesignstudio-mcp.yml
  - type: LLMsTxt
    url: llms/agrodesignstudio-shop-llms.txt
maintainers:
- FN: Kin Lane
  email: kin@apievangelist.com
- FN: APIs.json
  email: info@apis.io
common:
- type: DomainSecurity
  url: security/agrodesignstudio-domain-security.yml
- type: Website
  url: https://www.agrodesign.co.jp/
- type: Support
  url: https://www.agrobox.jp/contact
- type: Blog
  url: https://www.agrodesign.co.jp/pages/2231598/blog
- type: PrivacyPolicy
  url: https://www.agrobox.jp/privacypolicy
- type: TermsOfService
  url: https://www.agrobox.jp/tokusyohou
- type: LinkedIn
  url: https://jp.linkedin.com/company/agrodesignstudios
- type: MCPServer
  url: mcp/agrodesignstudio-mcp.yml
- type: LLMsTxt
  url: llms/agrodesignstudio-llms.txt
- type: Authentication
  url: authentication/agrodesignstudio-authentication.yml
- type: Conformance
  url: conformance/agrodesignstudio-conformance.yml
- type: Conventions
  url: conventions/agrodesignstudio-conventions.yml
- type: RateLimits
  url: rate-limits/agrodesignstudio-rate-limits.yml
- type: Plans
  url: plans/agrodesignstudio-plans-pricing.yml
- type: Packages
  url: packages/agrodesignstudio-packages.yml
x-enrichment:
  date: '2026-09-13'
  status: enriched
  artifacts_added: 13
  pass: local-v3