STRING · Example Payload

Get Interaction Partners

Example: Retrieve interaction partners for human TP53 with high confidence (score >= 700)

BioinformaticsProteinsGenomicsLife SciencesResearchOpen Data

Get Interaction Partners is an example object payload from STRING, with 3 top-level fields. It illustrates the shape of data this provider's APIs accept or return.

Top-level fields

descriptionrequestresponse

Example Payload

{
  "description": "Example: Retrieve interaction partners for human TP53 with high confidence (score >= 700)",
  "request": {
    "method": "GET",
    "url": "https://string-db.org/api/json/interaction_partners",
    "parameters": {
      "identifiers": "9606.ENSP00000269305",
      "species": 9606,
      "limit": 5,
      "required_score": 700,
      "caller_identity": "example_pipeline"
    }
  },
  "response": [
    {
      "stringId_A": "9606.ENSP00000269305",
      "stringId_B": "9606.ENSP00000083083",
      "preferredName_A": "TP53",
      "preferredName_B": "MDM2",
      "ncbiTaxonId": 9606,
      "score": 0.999,
      "nscore": 0,
      "fscore": 0,
      "pscore": 0.061,
      "ascore": 0.101,
      "escore": 0.999,
      "dscore": 0.9,
      "tscore": 0.963
    },
    {
      "stringId_A": "9606.ENSP00000269305",
      "stringId_B": "9606.ENSP00000366955",
      "preferredName_A": "TP53",
      "preferredName_B": "ATM",
      "ncbiTaxonId": 9606,
      "score": 0.993,
      "nscore": 0,
      "fscore": 0,
      "pscore": 0.045,
      "ascore": 0.072,
      "escore": 0.993,
      "dscore": 0.9,
      "tscore": 0.871
    }
  ]
}