Reactome

Reactome Token API

Previous queries filter

GitHub OpenAPI

Operations 13

GET /token/{token} Returns the result associated with the token #
POST /token/{token}/filter/pathways Returns the result for the pathway ids sent by post (when they are present in… #
GET /token/{token}/filter/species/{species} Filters the result by species #
POST /token/{token}/found/all Returns a summary of the contained identifiers and interactors for each… #
GET /token/{token}/found/all/{pathway} Returns a summary of the contained identifiers and interactors for a given… #
GET /token/{token}/found/entities/{pathway} Returns a summary of the found curated identifiers for a given pathway and token #
GET /token/{token}/found/interactors/{pathway} Returns a summary of the found interactors for a given pathway and token #
GET /token/{token}/notFound Returns a list of the identifiers not found for a given token #
GET /token/{token}/page/{pathway} Returns the page where the corresponding pathway is taking into account the… #
GET /token/{token}/pathways/binned Returns a list of binned hit pathway sizes associated with the token #
POST /token/{token}/reactions/pathways Returns the reaction ids of the pathway ids sent by post that are present in… #
GET /token/{token}/reactions/{pathway} Returns the reaction ids of the provided pathway id that are present in the… #
GET /token/{token}/resources Returns the resources summary associated with the token #

Documentation

📖
Documentation
https://reactome.org/dev/content-service
📖
Documentation
https://reactome.org/dev/analysis

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/reactome/refs/heads/main/openapi/reactome-token-api-openapi.yml

Other Resources

🔗
SwaggerUI
https://reactome.org/ContentService/
🔗
SwaggerUI
https://reactome.org/AnalysisService/

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OpenAPI Specification

reactome-token-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  title: Pathway Analysis Service Token API
  description: Provides an API for pathway over-representation and expression analysis as well as species comparison tool.
  termsOfService: /license
  contact:
    name: Reactome
    url: https://reactome.org
    email: help@reactome.org
  license:
    name: Creative Commons Attribution 3.0 Unsupported License
    url: https://creativecommons.org/licenses/by/3.0/legalcode
  version: '2.0'
servers:
- url: /AnalysisService
tags:


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# Full source: https://raw.githubusercontent.com/api-evangelist/reactome/refs/heads/main/openapi/reactome-token-api-openapi.yml