Kyoto Encyclopedia of Genes and Genomes (KEGG) get API

Retrieve specific database entries

OpenAPI Specification

kegg-get-api-openapi.yml Raw ↑
openapi: 3.1.0
info:
  title: KEGG REST conv get API
  description: 'The Kyoto Encyclopedia of Genes and Genomes (KEGG) REST API provides programmatic access to KEGG databases covering biological pathways, metabolic networks, molecular interactions, drug targets, disease associations, chemical compounds, genomic sequences, and functional orthologs across thousands of organisms. The API exposes seven core operations — info, list, find, get, conv, link, and ddi — enabling identifier conversion, cross-database linking, keyword and structure searches, and full entry retrieval in text, KGML, and JSON formats. Academic use is free; commercial use requires a license from Pathway Solutions. Rate limit is 3 requests per second per client.

    '
  version: 1.0.0
  contact:
    name: KEGG Support
    url: https://www.kegg.jp/kegg/feedback.html
  termsOfService: https://www.kegg.jp/kegg/legal.html
  license:
    name: Academic Use Only
    url: https://www.kegg.jp/kegg/legal.html
servers:
- url: https://rest.kegg.jp
  description: KEGG REST API server
tags:
- name: get
  description: Retrieve specific database entries
paths:
  /get/{dbentries}:
    get:
      operationId: getEntries
      summary: Retrieve database entries
      description: 'Retrieve one or more KEGG database entries in their default flat-file format. Up to 10 entries can be retrieved in a single request by separating identifiers with plus signs (e.g., hsa:10458+ece:Z5100).

        '
      tags:
      - get
      parameters:
      - name: dbentries
        in: path
        required: true
        description: 'One or more KEGG entry identifiers, separated by plus signs. Maximum 10 entries per request. Format: database:id (e.g., hsa:10458, cpd:C01290, path:hsa00010).

          '
        schema:
          type: string
          example: hsa:10458+ece:Z5100
      responses:
        '200':
          description: KEGG flat-file format entry data
          content:
            text/plain:
              schema:
                type: string
        '400':
          description: Bad request
        '404':
          description: Not found
  /get/{dbentries}/{option}:
    get:
      operationId: getEntriesWithOption
      summary: Retrieve database entries in a specific format
      description: 'Retrieve one or more KEGG database entries in a specified output format. Options include amino acid sequences, nucleotide sequences, molecular structure files, pathway images, KGML XML, and JSON.

        '
      tags:
      - get
      parameters:
      - name: dbentries
        in: path
        required: true
        description: 'One or more KEGG entry identifiers separated by plus signs. Maximum 10 entries per request.

          '
        schema:
          type: string
      - name: option
        in: path
        required: true
        description: Output format option
        schema:
          type: string
          enum:
          - aaseq
          - ntseq
          - mol
          - kcf
          - image
          - image2x
          - conf
          - kgml
          - json
      responses:
        '200':
          description: Entry data in the requested format
          content:
            text/plain:
              schema:
                type: string
            application/xml:
              schema:
                type: string
            application/json:
              schema:
                type: object
            image/gif:
              schema:
                type: string
                format: binary
            image/png:
              schema:
                type: string
                format: binary
        '400':
          description: Bad request
        '404':
          description: Not found
externalDocs:
  description: KEGG API Documentation
  url: https://www.kegg.jp/kegg/rest/keggapi.html