Helena Bioinformatics

Helena Bioinformatics Findings API

The findings API from Helena Bioinformatics — 2 operation(s) for findings.

GitHub OpenAPI

Operations 2

GET /sessions/{session_id}/findings Get P/LP variant findings #
GET /sessions/{session_id}/variants/lookup Lookup variant_idx by genomic coordinates #

Specifications

⚙
OpenAPI
https://artifacts.apis.io/helena-bio/openapi/helena-bio-findings-api-openapi.yml

Schemas & Data

📊
JSONSchema
https://artifacts.apis.io/helena-bio/json-schema/helena-bio-mtdna-curation-fields-schema.json
📊
JSONSchema
https://artifacts.apis.io/helena-bio/json-schema/helena-bio-section-response-schema.json
📊
JSONSchema
https://artifacts.apis.io/helena-bio/json-schema/helena-bio-clin-var-lite-export-request-schema.json
📊
JSONSchema
https://artifacts.apis.io/helena-bio/json-schema/helena-bio-gene-literature-response-schema.json
📊
JSONSchema
https://artifacts.apis.io/helena-bio/json-schema/helena-bio-reclassification-run-detail-schema-schema.json
📊
JSONSchema
https://artifacts.apis.io/helena-bio/json-schema/helena-bio-vep-cache-stats-response-schema.json

Work with this as data

Every API here is available over the APIs.io API and to AI agents over MCP.

MCP server

One button, every client — Claude, Cursor, VS Code and the rest.

https://apis.io/mcp

Tools for apis

7 MCP tools reach this
  • find_apisBrowse and filter every API in the catalog.
  • get_api_artifactsOne API's artifacts, grouped by type.
  • get_openapiThe primary OpenAPI for this API.
  • find_similar_apisAPIs that look like this one.
  • apis_io_searchSTART HERE — APIs, providers and tags for one query, each with its total.
  • resolveTurn a domain, URL or GitHub org into the provider it belongs to.
  • find_cohortsEvery scored population of providers in the catalog.
All 92 tools →

Call it yourself

curl for this page
This API 
curl "https://apis.io/api/v1/apis/helena-bio:helena-bio-findings-api"
All apis 
curl "https://apis.io/api/v1/apis?limit=25"

Discovery needs no key. Ratings and market analysis are Pro.

Get an API key

Free tier, no form to fill in. Signing in shares your email address with us — we store it to create your key and to recognise you if you sign in with another provider. See our Privacy Policy and Terms.

GitHub Google LinkedIn

A second provider on the same verified email joins the account you already have.

OpenAPI Specification

helena-bio-findings-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  title: Helix Insight - Variant Analysis Service Findings API
  description: AI-powered variant analysis and interpretation service
  version: 0.1.0
tags:
- name: Findings
paths:
  /sessions/{session_id}/findings:
    get:
      tags:
      - Findings
      summary: Get P/LP variant findings
      description: Return Pathogenic and Likely Pathogenic variants for a session from DuckDB
      operationId: get_session_findings_sessions__session_id__findings_get
      parameters:
      - name: session_id
        in: path
        required: true
        schema:
          type: string
          format: uuid
          title: Session Id
      responses:
        '200':
          description: Successful Response
          content:
            application/json:
              schema:
                type: object
                additionalProperties: true
                title: Response Get Session Findings Sessions  Session Id  Findings Get
        '422':
          description: Validation Error
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/HTTPValidationError'
  /sessions/{session_id}/variants/lookup:
    get:
      tags:
      - Findings
      summary: Lookup variant_idx by genomic coordinates
      description: Resolve variant_idx from chromosome, position, ref, alt. Used for cross-session navigation.
      operationId: lookup_variant_sessions__session_id__variants_lookup_get
      parameters:
      - name: session_id
        in: path
        required: true
        schema:
          type: string
          format: uuid
          title: Session Id
      - name: chromosome
        in: query
        required: true
        schema:
          type: string
          title: Chromosome
      - name: position
        in: query
        required: true
        schema:
          type: integer
          title: Position
      - name: ref
        in: query
        required: true
        schema:
          type: string
          title: Ref
      - name: alt
        in: query
        required: true
        schema:
          type: string
          title: Alt
      responses:
        '200':
          description: Successful Response
          content:
            application/json:
              schema:
                type: object
                additionalProperties: true
                title: Response Lookup Variant Sessions  Session Id  Variants Lookup Get
        '422':
          description: Validation Error
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/HTTPValidationError'
components:
  schemas:
    HTTPValidationError:
      properties:
        detail:
          items:
            $ref: '#/components/schemas/ValidationError'
          type: array
          title: Detail
      type: object
      title: HTTPValidationError
    ValidationError:
      properties:
        loc:
          items:
            anyOf:
            - type: string
            - type: integer
          type: array
          title: Location
        msg:
          type: string
          title: Message
        type:
          type: string
          title: Error Type
        input:
          title: Input
        ctx:
          type: object
          title: Context
      type: object
      required:
      - loc
      - msg
      - type
      title: ValidationError
  securitySchemes:
    HTTPBearer:
      type: http
      scheme: bearer