Benchling · Schema

RnaSequenceBaseRequest

Life SciencesBiotechnologyR&DMolecular BiologyLaboratory Information ManagementElectronic Lab NotebookAssay ManagementInventorySequence ManagementExperiment WorkflowsRESTWebhook

Properties

Name Type Description
aliases array Aliases to add to the RNA sequence
annotations array Annotations to create on the RNA sequence.
authorIds array IDs of users to set as the RNA sequence's authors.
bases string Base pairs for the RNA sequence.
customFields object Custom fields to add to the RNA sequence. Every field should have its name as a key, mapping to an object with information about the value of the field.
fields object Fields to set on the RNA sequence. Must correspond with the schema's field definitions. Every field should have its name as a key, mapping to an object with information about the value of the field.
folderId string ID of the folder containing the RNA sequence.
helm string Representation of the RNA sequence in HELM syntax, including any chemical modifications
isCircular boolean Whether the RNA sequence is circular or linear. RNA sequences can only be linear
name string Name of the RNA sequence.
parts array
primers array
schemaId string ID of the RNA sequence's schema.
translations array Translations to create on the RNA sequence. Translations are specified by either a combination of 'start' and 'end' fields, or a list of regions. Both cannot be provided.
View JSON Schema on GitHub

JSON Schema

RnaSequenceBaseRequest.json Raw ↑
{
  "$schema": "https://json-schema.org/draft/2020-12/schema",
  "$id": "https://api-evangelist.github.io/benchling/json-schema/RnaSequenceBaseRequest.json",
  "title": "RnaSequenceBaseRequest",
  "allOf": [
    {
      "properties": {
        "aliases": {
          "description": "Aliases to add to the RNA sequence",
          "items": {
            "type": "string"
          },
          "type": "array"
        },
        "annotations": {
          "description": "Annotations to create on the RNA sequence.\n",
          "items": {
            "$ref": "#/components/schemas/RnaAnnotation"
          },
          "type": "array"
        },
        "authorIds": {
          "description": "IDs of users to set as the RNA sequence's authors.",
          "items": {
            "type": "string"
          },
          "type": "array"
        },
        "bases": {
          "description": "Base pairs for the RNA sequence.\n",
          "type": "string"
        },
        "customFields": {
          "allOf": [
            {
              "$ref": "#/components/schemas/CustomFields"
            }
          ],
          "description": "Custom fields to add to the RNA sequence. Every field should have its name as a key, mapping to an object with information about the value of the field.\n"
        },
        "fields": {
          "allOf": [
            {
              "$ref": "#/components/schemas/Fields"
            }
          ],
          "description": "Fields to set on the RNA sequence. Must correspond with the schema's field definitions. Every field should have its name as a key, mapping to an object with information about the value of the field.\n"
        },
        "folderId": {
          "description": "ID of the folder containing the RNA sequence.\n",
          "type": "string"
        },
        "helm": {
          "description": "Representation of the RNA sequence in HELM syntax, including any chemical modifications",
          "example": "RNA1{r(A)p.r([impr2G])p.r(G)[Ssp].r(A)p.r(U)p.r(U)p}$$$$V2.0",
          "type": "string"
        },
        "isCircular": {
          "description": "Whether the RNA sequence is circular or linear. RNA sequences can only be linear\n",
          "example": false,
          "type": "boolean"
        },
        "name": {
          "description": "Name of the RNA sequence.\n",
          "type": "string"
        },
        "parts": {
          "items": {
            "$ref": "#/components/schemas/RnaSequencePart"
          },
          "type": "array"
        },
        "primers": {
          "items": {
            "$ref": "#/components/schemas/Primer"
          },
          "type": "array"
        },
        "schemaId": {
          "description": "ID of the RNA sequence's schema.\n",
          "type": "string"
        },
        "translations": {
          "description": "Translations to create on the RNA sequence. Translations are specified by either a combination of 'start' and 'end' fields, or a list of regions. Both cannot be provided.\n",
          "items": {
            "$ref": "#/components/schemas/Translation"
          },
          "type": "array"
        }
      }
    },
    {
      "$ref": "#/components/schemas/CustomNotationRequest"
    }
  ],
  "type": "object"
}

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