Benchling · Schema
AlignedNucleotideSequence
Life SciencesBiotechR&DMolecular BiologyLaboratory Information ManagementElectronic Lab NotebookAssay ManagementInventory ManagementSequence ManagementExperiment WorkflowsRESTWebhook
Properties
| Name | Type | Description |
|---|---|---|
| bases | string | |
| dnaSequenceId | string | |
| name | string | |
| pairwiseIdentity | number | Fraction of bases between trimStart and trimEnd that match the template bases. Only present for Template Alignments; Will be empty for Consensus Alignments. |
| sequenceId | string | |
| trimEnd | integer | |
| trimStart | integer |
JSON Schema
{
"$schema": "https://json-schema.org/draft/2020-12/schema",
"$id": "https://api-evangelist.github.io/benchling/json-schema/AlignedNucleotideSequence.json",
"title": "AlignedNucleotideSequence",
"properties": {
"bases": {
"example": "GTAGCAAAGANTAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGGGAAGCCATG",
"type": "string"
},
"dnaSequenceId": {
"deprecated": true,
"example": "seq_MYmsnS1u",
"nullable": true,
"type": "string"
},
"name": {
"example": "Gene001",
"type": "string"
},
"pairwiseIdentity": {
"description": "Fraction of bases between trimStart and trimEnd that match the template bases. Only present for Template Alignments; Will be empty for Consensus Alignments.\n",
"example": 0.505,
"format": "float",
"type": "number"
},
"sequenceId": {
"example": "seq_MYmsnS1u",
"nullable": true,
"type": "string"
},
"trimEnd": {
"example": 60,
"type": "integer"
},
"trimStart": {
"example": 0,
"type": "integer"
}
},
"type": "object"
}
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