Genomic Intelligence · JSON-LD Context
Genomicintelligence Ai Context
JSON-LD context defining the semantic vocabulary for Genomicintelligence Ai from Genomic Intelligence.
69 Classes
111 Properties
4 Namespaces
Namespaces
schema:
https://schema.org/
xsd:
http://www.w3.org/2001/XMLSchema#
dcterms:
http://purl.org/dc/terms/
genomicintelligence:
https://genomicintelligence.ai/schema#
Classes
AnnotationCounts
AnnotationData
AnnotationInput
AnnotationOptions
AnnotationPredictRequest
AsyncAcceptedData
AsyncAcceptedResponse
AsyncMeta
BioSpec
ChromatinCounts
ChromatinData
ChromatinInput
ChromatinOptions
ChromatinPredictRequest
EnhancerCounts
EnhancerData
EnhancerInput
EnhancerPredictRequest
ErrorBody
ErrorResponse
ExpressionCounts
ExpressionData
ExpressionInput
ExpressionOptions
ExpressionPredictRequest
FindGenesAndPredictExpressionCounts
FindGenesAndPredictExpressionData
FindGenesAndPredictExpressionInput
FindGenesAndPredictExpressionMeta
FindGenesAndPredictExpressionOptions
FindGenesAndPredictExpressionRequest
FindGenesAndPredictExpressionResponse
GeneAnnotationProvenance
GeneExpressionPredictionData
GenomicVariantInterpretationCounts
GenomicVariantInterpretationData
GenomicVariantInterpretationMeta
GenomicVariantInterpretationOptions
GenomicVariantInterpretationOptionsApplied
GenomicVariantInterpretationRequest
GenomicVariantInterpretationResponse
HealthResponse
JobLinks
JobListResponse
JobProgress
JobProgressData
JobProgressResponse
JobSummary
Meta
ModelNotFoundDetails
PredictResponse
PromoterCounts
PromoterData
PromoterInput
PromoterOptions
PromoterPredictRequest
S3ObjectInput
SpliceCounts
SpliceData
SpliceInput
SpliceOptions
SplicePredictRequest
StageTimings
SyncTooLargeDetails
TaskModelInfo
TaskModelsResponse
TaskNotSupportedByModelDetails
ValidationFailedDetails
VariantObjectRef
Properties
| Property | Type | Container |
|---|---|---|
| task | string | |
| transcripts_found | integer | |
| model | string | |
| input | reference | |
| summary | ||
| formats | ||
| transcripts | list | |
| sequence_name | string | |
| shift_coordinates | ||
| reverse_complement | boolean | |
| sequence | string | |
| options | reference | |
| job_id | string | |
| status | string | |
| links | reference | |
| data | reference | |
| meta | reference | |
| request_id | string | |
| mode | string | |
| sequence_type | string | |
| tokenization | string | |
| kmer_k | ||
| max_tokens | integer | |
| request_max_bp | ||
| context_window_bp | ||
| trained_window_bp | ||
| recommended_flank_bp | ||
| organism | string | |
| capabilities | list | |
| output_formats | list | |
| training_data | ||
| windows_processed | integer | |
| total_annotations | integer | |
| windows | list | |
| tracks | ||
| threshold | decimal | |
| code | string | |
| message | string | |
| details | ||
| error | reference | |
| tss_index | ||
| scored_window | ||
| prediction | ||
| description | string | |
| genes_found | integer | |
| genes_predicted | integer | |
| genes_skipped | integer | |
| annotation_model | string | |
| expression_model | string | |
| annotation | ||
| expression_predictions | list | |
| cold_start | boolean | |
| model_load_time_ms | integer | |
| inference_time_ms | integer | |
| sequence_length | integer | |
| task_specific_counts | reference | |
| expression | reference | |
| build | string | |
| md5 | string | |
| start_sites | integer | |
| gene_index | integer | |
| gene_name | string | |
| strand | string | |
| tss_position | integer | |
| centered_sequence_length | integer | |
| expression_tpm | decimal | |
| skipped | boolean | |
| skip_reason | ||
| variants_in | integer | |
| annotated | integer | |
| not_run | integer | |
| not_run_reasons | ||
| annotated_alleles | integer | |
| associations | integer | |
| skipped_alleles | integer | |
| client_ref | ||
| output | reference | |
| counts | reference | |
| genome_build | string | |
| gene_annotation | reference | |
| options_applied | reference | |
| window | integer | |
| tissues | list | |
| genes | ||
| version | string | |
| result | string | |
| jobs | list | |
| count | integer | |
| current_percent | ||
| elapsed_seconds | decimal | |
| progress | reference | |
| created_at | decimal | |
| completed_at | ||
| requested_model | string | |
| available_models | list | |
| regions_found | integer | |
| regions | list | |
| window_details | list | |
| type | string | |
| uri | string | |
| sites_found | integer | |
| sites | list | |
| site_types | ||
| id | string | |
| name | string | |
| is_default | boolean | |
| bio_spec | ||
| default_model | ||
| models | list | |
| supported_tasks | list | |
| errors | list |
JSON-LD Document
{
"@context": {
"@vocab": "https://genomicintelligence.ai/schema#",
"schema": "https://schema.org/",
"xsd": "http://www.w3.org/2001/XMLSchema#",
"dcterms": "http://purl.org/dc/terms/",
"genomicintelligence": "https://genomicintelligence.ai/schema#",
"AnnotationCounts": "genomicintelligence:AnnotationCounts",
"task": {
"@id": "genomicintelligence:task",
"@type": "xsd:string"
},
"transcripts_found": {
"@id": "genomicintelligence:transcripts_found",
"@type": "xsd:integer"
},
"AnnotationData": "genomicintelligence:AnnotationData",
"model": {
"@id": "genomicintelligence:model",
"@type": "xsd:string"
},
"input": {
"@id": "genomicintelligence:input",
"@type": "@id"
},
"summary": {
"@id": "genomicintelligence:summary"
},
"formats": {
"@id": "genomicintelligence:formats"
},
"transcripts": {
"@id": "genomicintelligence:transcripts",
"@container": "@list"
},
"AnnotationInput": "genomicintelligence:AnnotationInput",
"sequence_name": {
"@id": "genomicintelligence:sequence_name",
"@type": "xsd:string"
},
"AnnotationOptions": "genomicintelligence:AnnotationOptions",
"shift_coordinates": {
"@id": "genomicintelligence:shift_coordinates"
},
"reverse_complement": {
"@id": "genomicintelligence:reverse_complement",
"@type": "xsd:boolean"
},
"AnnotationPredictRequest": "genomicintelligence:AnnotationPredictRequest",
"sequence": {
"@id": "genomicintelligence:sequence",
"@type": "xsd:string"
},
"options": {
"@id": "genomicintelligence:options",
"@type": "@id"
},
"AsyncAcceptedData": "genomicintelligence:AsyncAcceptedData",
"job_id": {
"@id": "genomicintelligence:job_id",
"@type": "xsd:string"
},
"status": {
"@id": "genomicintelligence:status",
"@type": "xsd:string"
},
"links": {
"@id": "genomicintelligence:links",
"@type": "@id"
},
"AsyncAcceptedResponse": "genomicintelligence:AsyncAcceptedResponse",
"data": {
"@id": "genomicintelligence:data",
"@type": "@id"
},
"meta": {
"@id": "genomicintelligence:meta",
"@type": "@id"
},
"AsyncMeta": "genomicintelligence:AsyncMeta",
"request_id": {
"@id": "genomicintelligence:request_id",
"@type": "xsd:string"
},
"mode": {
"@id": "genomicintelligence:mode",
"@type": "xsd:string"
},
"BioSpec": "genomicintelligence:BioSpec",
"sequence_type": {
"@id": "genomicintelligence:sequence_type",
"@type": "xsd:string"
},
"tokenization": {
"@id": "genomicintelligence:tokenization",
"@type": "xsd:string"
},
"kmer_k": {
"@id": "genomicintelligence:kmer_k"
},
"max_tokens": {
"@id": "genomicintelligence:max_tokens",
"@type": "xsd:integer"
},
"request_max_bp": {
"@id": "genomicintelligence:request_max_bp"
},
"context_window_bp": {
"@id": "genomicintelligence:context_window_bp"
},
"trained_window_bp": {
"@id": "genomicintelligence:trained_window_bp"
},
"recommended_flank_bp": {
"@id": "genomicintelligence:recommended_flank_bp"
},
"organism": {
"@id": "genomicintelligence:organism",
"@type": "xsd:string"
},
"capabilities": {
"@id": "genomicintelligence:capabilities",
"@container": "@list"
},
"output_formats": {
"@id": "genomicintelligence:output_formats",
"@container": "@list"
},
"training_data": {
"@id": "genomicintelligence:training_data"
},
"ChromatinCounts": "genomicintelligence:ChromatinCounts",
"windows_processed": {
"@id": "genomicintelligence:windows_processed",
"@type": "xsd:integer"
},
"total_annotations": {
"@id": "genomicintelligence:total_annotations",
"@type": "xsd:integer"
},
"ChromatinData": "genomicintelligence:ChromatinData",
"windows": {
"@id": "genomicintelligence:windows",
"@container": "@list"
},
"tracks": {
"@id": "genomicintelligence:tracks"
},
"ChromatinInput": "genomicintelligence:ChromatinInput",
"ChromatinOptions": "genomicintelligence:ChromatinOptions",
"threshold": {
"@id": "genomicintelligence:threshold",
"@type": "xsd:decimal"
},
"ChromatinPredictRequest": "genomicintelligence:ChromatinPredictRequest",
"EnhancerCounts": "genomicintelligence:EnhancerCounts",
"EnhancerData": "genomicintelligence:EnhancerData",
"EnhancerInput": "genomicintelligence:EnhancerInput",
"EnhancerPredictRequest": "genomicintelligence:EnhancerPredictRequest",
"ErrorBody": "genomicintelligence:ErrorBody",
"code": {
"@id": "genomicintelligence:code",
"@type": "xsd:string"
},
"message": {
"@id": "genomicintelligence:message",
"@type": "xsd:string"
},
"details": {
"@id": "genomicintelligence:details"
},
"ErrorResponse": "genomicintelligence:ErrorResponse",
"error": {
"@id": "genomicintelligence:error",
"@type": "@id"
},
"ExpressionCounts": "genomicintelligence:ExpressionCounts",
"tss_index": {
"@id": "genomicintelligence:tss_index"
},
"scored_window": {
"@id": "genomicintelligence:scored_window"
},
"ExpressionData": "genomicintelligence:ExpressionData",
"prediction": {
"@id": "genomicintelligence:prediction"
},
"ExpressionInput": "genomicintelligence:ExpressionInput",
"description": {
"@id": "genomicintelligence:description",
"@type": "xsd:string"
},
"ExpressionOptions": "genomicintelligence:ExpressionOptions",
"ExpressionPredictRequest": "genomicintelligence:ExpressionPredictRequest",
"FindGenesAndPredictExpressionCounts": "genomicintelligence:FindGenesAndPredictExpressionCounts",
"genes_found": {
"@id": "genomicintelligence:genes_found",
"@type": "xsd:integer"
},
"genes_predicted": {
"@id": "genomicintelligence:genes_predicted",
"@type": "xsd:integer"
},
"genes_skipped": {
"@id": "genomicintelligence:genes_skipped",
"@type": "xsd:integer"
},
"FindGenesAndPredictExpressionData": "genomicintelligence:FindGenesAndPredictExpressionData",
"annotation_model": {
"@id": "genomicintelligence:annotation_model",
"@type": "xsd:string"
},
"expression_model": {
"@id": "genomicintelligence:expression_model",
"@type": "xsd:string"
},
"annotation": {
"@id": "genomicintelligence:annotation"
},
"expression_predictions": {
"@id": "genomicintelligence:expression_predictions",
"@container": "@list"
},
"FindGenesAndPredictExpressionInput": "genomicintelligence:FindGenesAndPredictExpressionInput",
"FindGenesAndPredictExpressionMeta": "genomicintelligence:FindGenesAndPredictExpressionMeta",
"cold_start": {
"@id": "genomicintelligence:cold_start",
"@type": "xsd:boolean"
},
"model_load_time_ms": {
"@id": "genomicintelligence:model_load_time_ms",
"@type": "xsd:integer"
},
"inference_time_ms": {
"@id": "genomicintelligence:inference_time_ms",
"@type": "xsd:integer"
},
"sequence_length": {
"@id": "genomicintelligence:sequence_length",
"@type": "xsd:integer"
},
"task_specific_counts": {
"@id": "genomicintelligence:task_specific_counts",
"@type": "@id"
},
"expression": {
"@id": "genomicintelligence:expression",
"@type": "@id"
},
"FindGenesAndPredictExpressionOptions": "genomicintelligence:FindGenesAndPredictExpressionOptions",
"FindGenesAndPredictExpressionRequest": "genomicintelligence:FindGenesAndPredictExpressionRequest",
"FindGenesAndPredictExpressionResponse": "genomicintelligence:FindGenesAndPredictExpressionResponse",
"GeneAnnotationProvenance": "genomicintelligence:GeneAnnotationProvenance",
"build": {
"@id": "genomicintelligence:build",
"@type": "xsd:string"
},
"md5": {
"@id": "genomicintelligence:md5",
"@type": "xsd:string"
},
"start_sites": {
"@id": "genomicintelligence:start_sites",
"@type": "xsd:integer"
},
"GeneExpressionPredictionData": "genomicintelligence:GeneExpressionPredictionData",
"gene_index": {
"@id": "genomicintelligence:gene_index",
"@type": "xsd:integer"
},
"gene_name": {
"@id": "genomicintelligence:gene_name",
"@type": "xsd:string"
},
"strand": {
"@id": "genomicintelligence:strand",
"@type": "xsd:string"
},
"tss_position": {
"@id": "genomicintelligence:tss_position",
"@type": "xsd:integer"
},
"centered_sequence_length": {
"@id": "genomicintelligence:centered_sequence_length",
"@type": "xsd:integer"
},
"expression_tpm": {
"@id": "genomicintelligence:expression_tpm",
"@type": "xsd:decimal"
},
"skipped": {
"@id": "genomicintelligence:skipped",
"@type": "xsd:boolean"
},
"skip_reason": {
"@id": "genomicintelligence:skip_reason"
},
"GenomicVariantInterpretationCounts": "genomicintelligence:GenomicVariantInterpretationCounts",
"variants_in": {
"@id": "genomicintelligence:variants_in",
"@type": "xsd:integer"
},
"annotated": {
"@id": "genomicintelligence:annotated",
"@type": "xsd:integer"
},
"not_run": {
"@id": "genomicintelligence:not_run",
"@type": "xsd:integer"
},
"not_run_reasons": {
"@id": "genomicintelligence:not_run_reasons"
},
"annotated_alleles": {
"@id": "genomicintelligence:annotated_alleles",
"@type": "xsd:integer"
},
"associations": {
"@id": "genomicintelligence:associations",
"@type": "xsd:integer"
},
"skipped_alleles": {
"@id": "genomicintelligence:skipped_alleles",
"@type": "xsd:integer"
},
"GenomicVariantInterpretationData": "genomicintelligence:GenomicVariantInterpretationData",
"client_ref": {
"@id": "genomicintelligence:client_ref"
},
"output": {
"@id": "genomicintelligence:output",
"@type": "@id"
},
"counts": {
"@id": "genomicintelligence:counts",
"@type": "@id"
},
"GenomicVariantInterpretationMeta": "genomicintelligence:GenomicVariantInterpretationMeta",
"genome_build": {
"@id": "genomicintelligence:genome_build",
"@type": "xsd:string"
},
"gene_annotation": {
"@id": "genomicintelligence:gene_annotation",
"@type": "@id"
},
"options_applied": {
"@id": "genomicintelligence:options_applied",
"@type": "@id"
},
"GenomicVariantInterpretationOptions": "genomicintelligence:GenomicVariantInterpretationOptions",
"window": {
"@id": "genomicintelligence:window",
"@type": "xsd:integer"
},
"tissues": {
"@id": "genomicintelligence:tissues",
"@container": "@list"
},
"genes": {
"@id": "genomicintelligence:genes"
},
"GenomicVariantInterpretationOptionsApplied": "genomicintelligence:GenomicVariantInterpretationOptionsApplied",
"GenomicVariantInterpretationRequest": "genomicintelligence:GenomicVariantInterpretationRequest",
"GenomicVariantInterpretationResponse": "genomicintelligence:GenomicVariantInterpretationResponse",
"HealthResponse": "genomicintelligence:HealthResponse",
"version": {
"@id": "genomicintelligence:version",
"@type": "xsd:string"
},
"JobLinks": "genomicintelligence:JobLinks",
"result": {
"@id": "genomicintelligence:result",
"@type": "xsd:string"
},
"JobListResponse": "genomicintelligence:JobListResponse",
"jobs": {
"@id": "genomicintelligence:jobs",
"@container": "@list"
},
"count": {
"@id": "genomicintelligence:count",
"@type": "xsd:integer"
},
"JobProgress": "genomicintelligence:JobProgress",
"current_percent": {
"@id": "genomicintelligence:current_percent"
},
"elapsed_seconds": {
"@id": "genomicintelligence:elapsed_seconds",
"@type": "xsd:decimal"
},
"JobProgressData": "genomicintelligence:JobProgressData",
"progress": {
"@id": "genomicintelligence:progress",
"@type": "@id"
},
"JobProgressResponse": "genomicintelligence:JobProgressResponse",
"JobSummary": "genomicintelligence:JobSummary",
"created_at": {
"@id": "genomicintelligence:created_at",
"@type": "xsd:decimal"
},
"completed_at": {
"@id": "genomicintelligence:completed_at"
},
"Meta": "genomicintelligence:Meta",
"ModelNotFoundDetails": "genomicintelligence:ModelNotFoundDetails",
"requested_model": {
"@id": "genomicintelligence:requested_model",
"@type": "xsd:string"
},
"available_models": {
"@id": "genomicintelligence:available_models",
"@container": "@list"
},
"PredictResponse": "genomicintelligence:PredictResponse",
"PromoterCounts": "genomicintelligence:PromoterCounts",
"regions_found": {
"@id": "genomicintelligence:regions_found",
"@type": "xsd:integer"
},
"PromoterData": "genomicintelligence:PromoterData",
"regions": {
"@id": "genomicintelligence:regions",
"@container": "@list"
},
"window_details": {
"@id": "genomicintelligence:window_details",
"@container": "@list"
},
"PromoterInput": "genomicintelligence:PromoterInput",
"PromoterOptions": "genomicintelligence:PromoterOptions",
"PromoterPredictRequest": "genomicintelligence:PromoterPredictRequest",
"S3ObjectInput": "genomicintelligence:S3ObjectInput",
"type": {
"@id": "genomicintelligence:type",
"@type": "xsd:string"
},
"uri": {
"@id": "genomicintelligence:uri",
"@type": "xsd:string"
},
"SpliceCounts": "genomicintelligence:SpliceCounts",
"sites_found": {
"@id": "genomicintelligence:sites_found",
"@type": "xsd:integer"
},
"SpliceData": "genomicintelligence:SpliceData",
"sites": {
"@id": "genomicintelligence:sites",
"@container": "@list"
},
"SpliceInput": "genomicintelligence:SpliceInput",
"SpliceOptions": "genomicintelligence:SpliceOptions",
"site_types": {
"@id": "genomicintelligence:site_types"
},
"SplicePredictRequest": "genomicintelligence:SplicePredictRequest",
"StageTimings": "genomicintelligence:StageTimings",
"SyncTooLargeDetails": "genomicintelligence:SyncTooLargeDetails",
"TaskModelInfo": "genomicintelligence:TaskModelInfo",
"id": {
"@id": "genomicintelligence:id",
"@type": "xsd:string"
},
"name": {
"@id": "genomicintelligence:name",
"@type": "xsd:string"
},
"is_default": {
"@id": "genomicintelligence:is_default",
"@type": "xsd:boolean"
},
"bio_spec": {
"@id": "genomicintelligence:bio_spec"
},
"TaskModelsResponse": "genomicintelligence:TaskModelsResponse",
"default_model": {
"@id": "genomicintelligence:default_model"
},
"models": {
"@id": "genomicintelligence:models",
"@container": "@list"
},
"TaskNotSupportedByModelDetails": "genomicintelligence:TaskNotSupportedByModelDetails",
"supported_tasks": {
"@id": "genomicintelligence:supported_tasks",
"@container": "@list"
},
"ValidationFailedDetails": "genomicintelligence:ValidationFailedDetails",
"errors": {
"@id": "genomicintelligence:errors",
"@container": "@list"
},
"VariantObjectRef": "genomicintelligence:VariantObjectRef"
},
"@type": "schema:Dataset",
"schema:name": "Genomic Intelligence API JSON-LD context",
"schema:description": "A JSON-LD @context for the objects Genomic Intelligence's own API contract declares: one class per component schema, one property per declared field, typed from the contract. Derived by script (derive-json-ld.py, 2026-11-09) from openapi/genomicintelligence-ai-openapi.json.",
"dcterms:created": "2026-11-09",
"dcterms:source": [
"openapi/genomicintelligence-ai-openapi.json"
]
}