Genomic Intelligence · JSON-LD Context

Genomicintelligence Ai Context

JSON-LD context defining the semantic vocabulary for Genomicintelligence Ai from Genomic Intelligence.

69 Classes 111 Properties 4 Namespaces
View Context View on GitHub

Namespaces

schema: https://schema.org/
xsd: http://www.w3.org/2001/XMLSchema#
dcterms: http://purl.org/dc/terms/
genomicintelligence: https://genomicintelligence.ai/schema#

Classes

AnnotationCounts AnnotationData AnnotationInput AnnotationOptions AnnotationPredictRequest AsyncAcceptedData AsyncAcceptedResponse AsyncMeta BioSpec ChromatinCounts ChromatinData ChromatinInput ChromatinOptions ChromatinPredictRequest EnhancerCounts EnhancerData EnhancerInput EnhancerPredictRequest ErrorBody ErrorResponse ExpressionCounts ExpressionData ExpressionInput ExpressionOptions ExpressionPredictRequest FindGenesAndPredictExpressionCounts FindGenesAndPredictExpressionData FindGenesAndPredictExpressionInput FindGenesAndPredictExpressionMeta FindGenesAndPredictExpressionOptions FindGenesAndPredictExpressionRequest FindGenesAndPredictExpressionResponse GeneAnnotationProvenance GeneExpressionPredictionData GenomicVariantInterpretationCounts GenomicVariantInterpretationData GenomicVariantInterpretationMeta GenomicVariantInterpretationOptions GenomicVariantInterpretationOptionsApplied GenomicVariantInterpretationRequest GenomicVariantInterpretationResponse HealthResponse JobLinks JobListResponse JobProgress JobProgressData JobProgressResponse JobSummary Meta ModelNotFoundDetails PredictResponse PromoterCounts PromoterData PromoterInput PromoterOptions PromoterPredictRequest S3ObjectInput SpliceCounts SpliceData SpliceInput SpliceOptions SplicePredictRequest StageTimings SyncTooLargeDetails TaskModelInfo TaskModelsResponse TaskNotSupportedByModelDetails ValidationFailedDetails VariantObjectRef

Properties

Property Type Container
task string
transcripts_found integer
model string
input reference
summary
formats
transcripts list
sequence_name string
shift_coordinates
reverse_complement boolean
sequence string
options reference
job_id string
status string
links reference
data reference
meta reference
request_id string
mode string
sequence_type string
tokenization string
kmer_k
max_tokens integer
request_max_bp
context_window_bp
trained_window_bp
recommended_flank_bp
organism string
capabilities list
output_formats list
training_data
windows_processed integer
total_annotations integer
windows list
tracks
threshold decimal
code string
message string
details
error reference
tss_index
scored_window
prediction
description string
genes_found integer
genes_predicted integer
genes_skipped integer
annotation_model string
expression_model string
annotation
expression_predictions list
cold_start boolean
model_load_time_ms integer
inference_time_ms integer
sequence_length integer
task_specific_counts reference
expression reference
build string
md5 string
start_sites integer
gene_index integer
gene_name string
strand string
tss_position integer
centered_sequence_length integer
expression_tpm decimal
skipped boolean
skip_reason
variants_in integer
annotated integer
not_run integer
not_run_reasons
annotated_alleles integer
associations integer
skipped_alleles integer
client_ref
output reference
counts reference
genome_build string
gene_annotation reference
options_applied reference
window integer
tissues list
genes
version string
result string
jobs list
count integer
current_percent
elapsed_seconds decimal
progress reference
created_at decimal
completed_at
requested_model string
available_models list
regions_found integer
regions list
window_details list
type string
uri string
sites_found integer
sites list
site_types
id string
name string
is_default boolean
bio_spec
default_model
models list
supported_tasks list
errors list

JSON-LD Document

Raw ↑
{
  "@context": {
    "@vocab": "https://genomicintelligence.ai/schema#",
    "schema": "https://schema.org/",
    "xsd": "http://www.w3.org/2001/XMLSchema#",
    "dcterms": "http://purl.org/dc/terms/",
    "genomicintelligence": "https://genomicintelligence.ai/schema#",
    "AnnotationCounts": "genomicintelligence:AnnotationCounts",
    "task": {
      "@id": "genomicintelligence:task",
      "@type": "xsd:string"
    },
    "transcripts_found": {
      "@id": "genomicintelligence:transcripts_found",
      "@type": "xsd:integer"
    },
    "AnnotationData": "genomicintelligence:AnnotationData",
    "model": {
      "@id": "genomicintelligence:model",
      "@type": "xsd:string"
    },
    "input": {
      "@id": "genomicintelligence:input",
      "@type": "@id"
    },
    "summary": {
      "@id": "genomicintelligence:summary"
    },
    "formats": {
      "@id": "genomicintelligence:formats"
    },
    "transcripts": {
      "@id": "genomicintelligence:transcripts",
      "@container": "@list"
    },
    "AnnotationInput": "genomicintelligence:AnnotationInput",
    "sequence_name": {
      "@id": "genomicintelligence:sequence_name",
      "@type": "xsd:string"
    },
    "AnnotationOptions": "genomicintelligence:AnnotationOptions",
    "shift_coordinates": {
      "@id": "genomicintelligence:shift_coordinates"
    },
    "reverse_complement": {
      "@id": "genomicintelligence:reverse_complement",
      "@type": "xsd:boolean"
    },
    "AnnotationPredictRequest": "genomicintelligence:AnnotationPredictRequest",
    "sequence": {
      "@id": "genomicintelligence:sequence",
      "@type": "xsd:string"
    },
    "options": {
      "@id": "genomicintelligence:options",
      "@type": "@id"
    },
    "AsyncAcceptedData": "genomicintelligence:AsyncAcceptedData",
    "job_id": {
      "@id": "genomicintelligence:job_id",
      "@type": "xsd:string"
    },
    "status": {
      "@id": "genomicintelligence:status",
      "@type": "xsd:string"
    },
    "links": {
      "@id": "genomicintelligence:links",
      "@type": "@id"
    },
    "AsyncAcceptedResponse": "genomicintelligence:AsyncAcceptedResponse",
    "data": {
      "@id": "genomicintelligence:data",
      "@type": "@id"
    },
    "meta": {
      "@id": "genomicintelligence:meta",
      "@type": "@id"
    },
    "AsyncMeta": "genomicintelligence:AsyncMeta",
    "request_id": {
      "@id": "genomicintelligence:request_id",
      "@type": "xsd:string"
    },
    "mode": {
      "@id": "genomicintelligence:mode",
      "@type": "xsd:string"
    },
    "BioSpec": "genomicintelligence:BioSpec",
    "sequence_type": {
      "@id": "genomicintelligence:sequence_type",
      "@type": "xsd:string"
    },
    "tokenization": {
      "@id": "genomicintelligence:tokenization",
      "@type": "xsd:string"
    },
    "kmer_k": {
      "@id": "genomicintelligence:kmer_k"
    },
    "max_tokens": {
      "@id": "genomicintelligence:max_tokens",
      "@type": "xsd:integer"
    },
    "request_max_bp": {
      "@id": "genomicintelligence:request_max_bp"
    },
    "context_window_bp": {
      "@id": "genomicintelligence:context_window_bp"
    },
    "trained_window_bp": {
      "@id": "genomicintelligence:trained_window_bp"
    },
    "recommended_flank_bp": {
      "@id": "genomicintelligence:recommended_flank_bp"
    },
    "organism": {
      "@id": "genomicintelligence:organism",
      "@type": "xsd:string"
    },
    "capabilities": {
      "@id": "genomicintelligence:capabilities",
      "@container": "@list"
    },
    "output_formats": {
      "@id": "genomicintelligence:output_formats",
      "@container": "@list"
    },
    "training_data": {
      "@id": "genomicintelligence:training_data"
    },
    "ChromatinCounts": "genomicintelligence:ChromatinCounts",
    "windows_processed": {
      "@id": "genomicintelligence:windows_processed",
      "@type": "xsd:integer"
    },
    "total_annotations": {
      "@id": "genomicintelligence:total_annotations",
      "@type": "xsd:integer"
    },
    "ChromatinData": "genomicintelligence:ChromatinData",
    "windows": {
      "@id": "genomicintelligence:windows",
      "@container": "@list"
    },
    "tracks": {
      "@id": "genomicintelligence:tracks"
    },
    "ChromatinInput": "genomicintelligence:ChromatinInput",
    "ChromatinOptions": "genomicintelligence:ChromatinOptions",
    "threshold": {
      "@id": "genomicintelligence:threshold",
      "@type": "xsd:decimal"
    },
    "ChromatinPredictRequest": "genomicintelligence:ChromatinPredictRequest",
    "EnhancerCounts": "genomicintelligence:EnhancerCounts",
    "EnhancerData": "genomicintelligence:EnhancerData",
    "EnhancerInput": "genomicintelligence:EnhancerInput",
    "EnhancerPredictRequest": "genomicintelligence:EnhancerPredictRequest",
    "ErrorBody": "genomicintelligence:ErrorBody",
    "code": {
      "@id": "genomicintelligence:code",
      "@type": "xsd:string"
    },
    "message": {
      "@id": "genomicintelligence:message",
      "@type": "xsd:string"
    },
    "details": {
      "@id": "genomicintelligence:details"
    },
    "ErrorResponse": "genomicintelligence:ErrorResponse",
    "error": {
      "@id": "genomicintelligence:error",
      "@type": "@id"
    },
    "ExpressionCounts": "genomicintelligence:ExpressionCounts",
    "tss_index": {
      "@id": "genomicintelligence:tss_index"
    },
    "scored_window": {
      "@id": "genomicintelligence:scored_window"
    },
    "ExpressionData": "genomicintelligence:ExpressionData",
    "prediction": {
      "@id": "genomicintelligence:prediction"
    },
    "ExpressionInput": "genomicintelligence:ExpressionInput",
    "description": {
      "@id": "genomicintelligence:description",
      "@type": "xsd:string"
    },
    "ExpressionOptions": "genomicintelligence:ExpressionOptions",
    "ExpressionPredictRequest": "genomicintelligence:ExpressionPredictRequest",
    "FindGenesAndPredictExpressionCounts": "genomicintelligence:FindGenesAndPredictExpressionCounts",
    "genes_found": {
      "@id": "genomicintelligence:genes_found",
      "@type": "xsd:integer"
    },
    "genes_predicted": {
      "@id": "genomicintelligence:genes_predicted",
      "@type": "xsd:integer"
    },
    "genes_skipped": {
      "@id": "genomicintelligence:genes_skipped",
      "@type": "xsd:integer"
    },
    "FindGenesAndPredictExpressionData": "genomicintelligence:FindGenesAndPredictExpressionData",
    "annotation_model": {
      "@id": "genomicintelligence:annotation_model",
      "@type": "xsd:string"
    },
    "expression_model": {
      "@id": "genomicintelligence:expression_model",
      "@type": "xsd:string"
    },
    "annotation": {
      "@id": "genomicintelligence:annotation"
    },
    "expression_predictions": {
      "@id": "genomicintelligence:expression_predictions",
      "@container": "@list"
    },
    "FindGenesAndPredictExpressionInput": "genomicintelligence:FindGenesAndPredictExpressionInput",
    "FindGenesAndPredictExpressionMeta": "genomicintelligence:FindGenesAndPredictExpressionMeta",
    "cold_start": {
      "@id": "genomicintelligence:cold_start",
      "@type": "xsd:boolean"
    },
    "model_load_time_ms": {
      "@id": "genomicintelligence:model_load_time_ms",
      "@type": "xsd:integer"
    },
    "inference_time_ms": {
      "@id": "genomicintelligence:inference_time_ms",
      "@type": "xsd:integer"
    },
    "sequence_length": {
      "@id": "genomicintelligence:sequence_length",
      "@type": "xsd:integer"
    },
    "task_specific_counts": {
      "@id": "genomicintelligence:task_specific_counts",
      "@type": "@id"
    },
    "expression": {
      "@id": "genomicintelligence:expression",
      "@type": "@id"
    },
    "FindGenesAndPredictExpressionOptions": "genomicintelligence:FindGenesAndPredictExpressionOptions",
    "FindGenesAndPredictExpressionRequest": "genomicintelligence:FindGenesAndPredictExpressionRequest",
    "FindGenesAndPredictExpressionResponse": "genomicintelligence:FindGenesAndPredictExpressionResponse",
    "GeneAnnotationProvenance": "genomicintelligence:GeneAnnotationProvenance",
    "build": {
      "@id": "genomicintelligence:build",
      "@type": "xsd:string"
    },
    "md5": {
      "@id": "genomicintelligence:md5",
      "@type": "xsd:string"
    },
    "start_sites": {
      "@id": "genomicintelligence:start_sites",
      "@type": "xsd:integer"
    },
    "GeneExpressionPredictionData": "genomicintelligence:GeneExpressionPredictionData",
    "gene_index": {
      "@id": "genomicintelligence:gene_index",
      "@type": "xsd:integer"
    },
    "gene_name": {
      "@id": "genomicintelligence:gene_name",
      "@type": "xsd:string"
    },
    "strand": {
      "@id": "genomicintelligence:strand",
      "@type": "xsd:string"
    },
    "tss_position": {
      "@id": "genomicintelligence:tss_position",
      "@type": "xsd:integer"
    },
    "centered_sequence_length": {
      "@id": "genomicintelligence:centered_sequence_length",
      "@type": "xsd:integer"
    },
    "expression_tpm": {
      "@id": "genomicintelligence:expression_tpm",
      "@type": "xsd:decimal"
    },
    "skipped": {
      "@id": "genomicintelligence:skipped",
      "@type": "xsd:boolean"
    },
    "skip_reason": {
      "@id": "genomicintelligence:skip_reason"
    },
    "GenomicVariantInterpretationCounts": "genomicintelligence:GenomicVariantInterpretationCounts",
    "variants_in": {
      "@id": "genomicintelligence:variants_in",
      "@type": "xsd:integer"
    },
    "annotated": {
      "@id": "genomicintelligence:annotated",
      "@type": "xsd:integer"
    },
    "not_run": {
      "@id": "genomicintelligence:not_run",
      "@type": "xsd:integer"
    },
    "not_run_reasons": {
      "@id": "genomicintelligence:not_run_reasons"
    },
    "annotated_alleles": {
      "@id": "genomicintelligence:annotated_alleles",
      "@type": "xsd:integer"
    },
    "associations": {
      "@id": "genomicintelligence:associations",
      "@type": "xsd:integer"
    },
    "skipped_alleles": {
      "@id": "genomicintelligence:skipped_alleles",
      "@type": "xsd:integer"
    },
    "GenomicVariantInterpretationData": "genomicintelligence:GenomicVariantInterpretationData",
    "client_ref": {
      "@id": "genomicintelligence:client_ref"
    },
    "output": {
      "@id": "genomicintelligence:output",
      "@type": "@id"
    },
    "counts": {
      "@id": "genomicintelligence:counts",
      "@type": "@id"
    },
    "GenomicVariantInterpretationMeta": "genomicintelligence:GenomicVariantInterpretationMeta",
    "genome_build": {
      "@id": "genomicintelligence:genome_build",
      "@type": "xsd:string"
    },
    "gene_annotation": {
      "@id": "genomicintelligence:gene_annotation",
      "@type": "@id"
    },
    "options_applied": {
      "@id": "genomicintelligence:options_applied",
      "@type": "@id"
    },
    "GenomicVariantInterpretationOptions": "genomicintelligence:GenomicVariantInterpretationOptions",
    "window": {
      "@id": "genomicintelligence:window",
      "@type": "xsd:integer"
    },
    "tissues": {
      "@id": "genomicintelligence:tissues",
      "@container": "@list"
    },
    "genes": {
      "@id": "genomicintelligence:genes"
    },
    "GenomicVariantInterpretationOptionsApplied": "genomicintelligence:GenomicVariantInterpretationOptionsApplied",
    "GenomicVariantInterpretationRequest": "genomicintelligence:GenomicVariantInterpretationRequest",
    "GenomicVariantInterpretationResponse": "genomicintelligence:GenomicVariantInterpretationResponse",
    "HealthResponse": "genomicintelligence:HealthResponse",
    "version": {
      "@id": "genomicintelligence:version",
      "@type": "xsd:string"
    },
    "JobLinks": "genomicintelligence:JobLinks",
    "result": {
      "@id": "genomicintelligence:result",
      "@type": "xsd:string"
    },
    "JobListResponse": "genomicintelligence:JobListResponse",
    "jobs": {
      "@id": "genomicintelligence:jobs",
      "@container": "@list"
    },
    "count": {
      "@id": "genomicintelligence:count",
      "@type": "xsd:integer"
    },
    "JobProgress": "genomicintelligence:JobProgress",
    "current_percent": {
      "@id": "genomicintelligence:current_percent"
    },
    "elapsed_seconds": {
      "@id": "genomicintelligence:elapsed_seconds",
      "@type": "xsd:decimal"
    },
    "JobProgressData": "genomicintelligence:JobProgressData",
    "progress": {
      "@id": "genomicintelligence:progress",
      "@type": "@id"
    },
    "JobProgressResponse": "genomicintelligence:JobProgressResponse",
    "JobSummary": "genomicintelligence:JobSummary",
    "created_at": {
      "@id": "genomicintelligence:created_at",
      "@type": "xsd:decimal"
    },
    "completed_at": {
      "@id": "genomicintelligence:completed_at"
    },
    "Meta": "genomicintelligence:Meta",
    "ModelNotFoundDetails": "genomicintelligence:ModelNotFoundDetails",
    "requested_model": {
      "@id": "genomicintelligence:requested_model",
      "@type": "xsd:string"
    },
    "available_models": {
      "@id": "genomicintelligence:available_models",
      "@container": "@list"
    },
    "PredictResponse": "genomicintelligence:PredictResponse",
    "PromoterCounts": "genomicintelligence:PromoterCounts",
    "regions_found": {
      "@id": "genomicintelligence:regions_found",
      "@type": "xsd:integer"
    },
    "PromoterData": "genomicintelligence:PromoterData",
    "regions": {
      "@id": "genomicintelligence:regions",
      "@container": "@list"
    },
    "window_details": {
      "@id": "genomicintelligence:window_details",
      "@container": "@list"
    },
    "PromoterInput": "genomicintelligence:PromoterInput",
    "PromoterOptions": "genomicintelligence:PromoterOptions",
    "PromoterPredictRequest": "genomicintelligence:PromoterPredictRequest",
    "S3ObjectInput": "genomicintelligence:S3ObjectInput",
    "type": {
      "@id": "genomicintelligence:type",
      "@type": "xsd:string"
    },
    "uri": {
      "@id": "genomicintelligence:uri",
      "@type": "xsd:string"
    },
    "SpliceCounts": "genomicintelligence:SpliceCounts",
    "sites_found": {
      "@id": "genomicintelligence:sites_found",
      "@type": "xsd:integer"
    },
    "SpliceData": "genomicintelligence:SpliceData",
    "sites": {
      "@id": "genomicintelligence:sites",
      "@container": "@list"
    },
    "SpliceInput": "genomicintelligence:SpliceInput",
    "SpliceOptions": "genomicintelligence:SpliceOptions",
    "site_types": {
      "@id": "genomicintelligence:site_types"
    },
    "SplicePredictRequest": "genomicintelligence:SplicePredictRequest",
    "StageTimings": "genomicintelligence:StageTimings",
    "SyncTooLargeDetails": "genomicintelligence:SyncTooLargeDetails",
    "TaskModelInfo": "genomicintelligence:TaskModelInfo",
    "id": {
      "@id": "genomicintelligence:id",
      "@type": "xsd:string"
    },
    "name": {
      "@id": "genomicintelligence:name",
      "@type": "xsd:string"
    },
    "is_default": {
      "@id": "genomicintelligence:is_default",
      "@type": "xsd:boolean"
    },
    "bio_spec": {
      "@id": "genomicintelligence:bio_spec"
    },
    "TaskModelsResponse": "genomicintelligence:TaskModelsResponse",
    "default_model": {
      "@id": "genomicintelligence:default_model"
    },
    "models": {
      "@id": "genomicintelligence:models",
      "@container": "@list"
    },
    "TaskNotSupportedByModelDetails": "genomicintelligence:TaskNotSupportedByModelDetails",
    "supported_tasks": {
      "@id": "genomicintelligence:supported_tasks",
      "@container": "@list"
    },
    "ValidationFailedDetails": "genomicintelligence:ValidationFailedDetails",
    "errors": {
      "@id": "genomicintelligence:errors",
      "@container": "@list"
    },
    "VariantObjectRef": "genomicintelligence:VariantObjectRef"
  },
  "@type": "schema:Dataset",
  "schema:name": "Genomic Intelligence API JSON-LD context",
  "schema:description": "A JSON-LD @context for the objects Genomic Intelligence's own API contract declares: one class per component schema, one property per declared field, typed from the contract. Derived by script (derive-json-ld.py, 2026-11-09) from openapi/genomicintelligence-ai-openapi.json.",
  "dcterms:created": "2026-11-09",
  "dcterms:source": [
    "openapi/genomicintelligence-ai-openapi.json"
  ]
}