Scispot

Scispot Labsheets API

LIMS-style structured data tables for registries, sample tracking, and assay data

GitHub OpenAPI

Operations 6

GET /labsheets List Labsheets #
GET /labsheets/{labsheetId}/rows Get Labsheet Rows #
POST /labsheets/{labsheetId}/rows Add Labsheet Row #
GET /labsheets/{labsheetId}/rows/{rowId} Get Labsheet Row #
PUT /labsheets/{labsheetId}/rows/{rowId} Update Labsheet Row #
DELETE /labsheets/{labsheetId}/rows/{rowId} Delete Labsheet Row #

Documentation

📖
Documentation
https://docs.scispot.com/

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/scispot/refs/heads/main/openapi/scispot-labsheets-api-openapi.yml

Schemas & Data

📊
JSONSchema
https://raw.githubusercontent.com/api-evangelist/scispot/refs/heads/main/json-schema/scispot-labsheet-schema.json

Other Resources

🔗
DeveloperPortal
https://www.scispot.com/compbio
🔗
SpectralRules
https://raw.githubusercontent.com/api-evangelist/scispot/refs/heads/main/rules/scispot-rules.yml
🔗
JSONLDContext
https://raw.githubusercontent.com/api-evangelist/scispot/refs/heads/main/json-ld/scispot-context.jsonld
🔗
Vocabulary
https://raw.githubusercontent.com/api-evangelist/scispot/refs/heads/main/vocabulary/scispot-vocabulary.yml

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OpenAPI Specification

scispot-labsheets-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  title: Scispot Labsheets API
  description: The Scispot REST API provides programmatic access to all features of the Scispot laboratory data platform.
  version: 1.0.0
  contact:
    name: Scispot Developer Support
    url: https://docs.scispot.com/
  termsOfService: https://www.scispot.com/terms
servers:
- url: https://api.scispot.com/v1
  description: Scispot Production API
security:
- ApiKeyAuth: []
tags:
- name: Labsheets
  description: LIMS-style structured data tables for registries, sample tracking, and assay data
paths:
  /labsheets:
    get:
      operationId: listLabsheets
      summary: List Labsheets
      description: Retrieve a list of all Labsheets in the workspace. Labsheets are structured data tables that serve as the LIMS backbone of Scispot, used for registries, sample tracking, assay results, and inventory.
      tags:
      - Labsheets
      parameters:
      - name: page
        in: query
        description: Page number for pagination
        required: false
        schema:
          type: integer
          minimum: 1
          default: 1
      - name: limit
        in: query
        description: Number of results per page
        required: false
        schema:
          type: integer
          minimum: 1
          maximum: 100
          default: 20
      responses:
        '200':
          description: List of labsheets
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/LabsheetListResponse'
        '401':
          $ref: '#/components/responses/Unauthorized'
  /labsheets/{labsheetId}/rows:
    get:
      operationId: getLabsheetRows
      summary: Get Labsheet Rows
      description: Retrieve all rows from a specific Labsheet. Returns structured data records with all column values for each row in the labsheet.
      tags:
      - Labsheets
      parameters:
      - name: labsheetId
        in: path
        description: Unique identifier of the Labsheet
        required: true
        schema:
          type: string
      - name: page
        in: query
        description: Page number for pagination
        required: false
        schema:
          type: integer
          default: 1
      - name: limit
        in: query
        description: Number of rows per page
        required: false
        schema:
          type: integer
          maximum: 100
          default: 50
      responses:
        '200':
          description: Labsheet rows
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/LabsheetRowsResponse'
        '401':
          $ref: '#/components/responses/Unauthorized'
        '404':
          $ref: '#/components/responses/NotFound'
    post:
      operationId: addLabsheetRow
      summary: Add Labsheet Row
      description: Add a new row to a Labsheet. Accepts column values as key-value pairs matching the Labsheet schema. Supports barcode assignment and metadata attachment for sample tracking workflows.
      tags:
      - Labsheets
      parameters:
      - name: labsheetId
        in: path
        description: Unique identifier of the Labsheet
        required: true
        schema:
          type: string
      requestBody:
        required: true
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/LabsheetRowInput'
      responses:
        '201':
          description: Row added successfully
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/LabsheetRow'
        '400':
          $ref: '#/components/responses/BadRequest'
        '401':
          $ref: '#/components/responses/Unauthorized'
        '404':
          $ref: '#/components/responses/NotFound'
  /labsheets/{labsheetId}/rows/{rowId}:
    get:
      operationId: getLabsheetRow
      summary: Get Labsheet Row
      description: Retrieve a single row from a Labsheet by its unique row identifier.
      tags:
      - Labsheets
      parameters:
      - name: labsheetId
        in: path
        description: Unique identifier of the Labsheet
        required: true
        schema:
          type: string
      - name: rowId
        in: path
        description: Unique identifier of the row
        required: true
        schema:
          type: string
      responses:
        '200':
          description: Labsheet row
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/LabsheetRow'
        '404':
          $ref: '#/components/responses/NotFound'
    put:
      operationId: updateLabsheetRow
      summary: Update Labsheet Row
      description: Update an existing row in a Labsheet. Accepts updated column values as key-value pairs. Only specified fields are updated.
      tags:
      - Labsheets
      parameters:
      - name: labsheetId
        in: path
        description: Unique identifier of the Labsheet
        required: true
        schema:
          type: string
      - name: rowId
        in: path
        description: Unique identifier of the row
        required: true
        schema:
          type: string
      requestBody:
        required: true
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/LabsheetRowInput'
      responses:
        '200':
          description: Row updated successfully
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/LabsheetRow'
        '401':
          $ref: '#/components/responses/Unauthorized'
        '404':
          $ref: '#/components/responses/NotFound'
    delete:
      operationId: deleteLabsheetRow
      summary: Delete Labsheet Row
      description: Delete a row from a Labsheet by its unique identifier.
      tags:
      - Labsheets
      parameters:
      - name: labsheetId
        in: path
        description: Unique identifier of the Labsheet
        required: true
        schema:
          type: string
      - name: rowId
        in: path
        description: Unique identifier of the row
        required: true
        schema:
          type: string
      responses:
        '204':
          description: Row deleted successfully
        '401':
          $ref: '#/components/responses/Unauthorized'
        '404':
          $ref: '#/components/responses/NotFound'
components:
  schemas:
    LabsheetColumn:
      type: object
      properties:
        name:
          type: string
          description: Column name
        type:
          type: string
          enum:
          - text
          - number
          - date
          - barcode
          - lookup
          - file
          - formula
          description: Column data type
        required:
          type: boolean
          description: Whether this column is required
    Labsheet:
      type: object
      properties:
        id:
          type: string
          description: Unique labsheet identifier
        name:
          type: string
          description: Name of the labsheet
        description:
          type: string
          description: Description of the labsheet purpose
        columns:
          type: array
          description: Column definitions for the labsheet
          items:
            $ref: '#/components/schemas/LabsheetColumn'
        rowCount:
          type: integer
          description: Number of rows in the labsheet
        createdAt:
          type: string
          format: date-time
        updatedAt:
          type: string
          format: date-time
    LabsheetListResponse:
      type: object
      properties:
        data:
          type: array
          items:
            $ref: '#/components/schemas/Labsheet'
        total:
          type: integer
          description: Total number of labsheets
        page:
          type: integer
        limit:
          type: integer
    LabsheetRowsResponse:
      type: object
      properties:
        data:
          type: array
          items:
            $ref: '#/components/schemas/LabsheetRow'
        total:
          type: integer
        page:
          type: integer
        limit:
          type: integer
    ErrorResponse:
      type: object
      properties:
        error:
          type: string
          description: Error type
        message:
          type: string
          description: Human-readable error message
        code:
          type: integer
          description: Error code
    LabsheetRowInput:
      type: object
      description: Input for creating or updating a labsheet row
      properties:
        barcode:
          type: string
          description: Optional barcode for the row
        data:
          type: object
          description: Column values as key-value pairs
          additionalProperties: true
      required:
      - data
    LabsheetRow:
      type: object
      properties:
        id:
          type: string
          description: Unique row identifier
        labsheetId:
          type: string
          description: Parent labsheet identifier
        barcode:
          type: string
          description: Barcode associated with this row
        data:
          type: object
          description: Column values as key-value pairs
          additionalProperties: true
        createdAt:
          type: string
          format: date-time
        updatedAt:
          type: string
          format: date-time
  responses:
    Unauthorized:
      description: API key missing or invalid
      content:
        application/json:
          schema:
            $ref: '#/components/schemas/ErrorResponse'
    BadRequest:
      description: Invalid request parameters or body
      content:
        application/json:
          schema:
            $ref: '#/components/schemas/ErrorResponse'
    NotFound:
      description: Requested resource not found
      content:
        application/json:
          schema:
            $ref: '#/components/schemas/ErrorResponse'
  securitySchemes:
    ApiKeyAuth:
      type: apiKey
      in: header
      name: apiKey
      description: Personal API token generated from Scispot Account Settings > Personal Tokens. All API requests require this header.