Oxford Nanopore Technologies Genomes API

The Genomes API from Oxford Nanopore Technologies — 1 operation(s) for genomes.

Documentation GitHub OpenAPI

Operations 1

GET /genomes/all/GCA/{gcaid}/{id}/{id}/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz GET /genomes/all/GCA/{gcaId}/{id}/{id}/GCA_000001405.15_GRCh38/seqs_for_alignmen… #

Specifications

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OpenAPI

https://artifacts.apis.io/oxford-nanopore-technologies/openapi/oxford-nanopore-technologies-genomes-api-openapi.yml

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OpenAPI Specification

openapi: 3.2.0
info:
  title: Oxford Nanopore Technologies Genomes API
  version: '2026-10-14'
  description: 'GENERATED FROM DOCUMENTATION by API Evangelist on 2026-10-14: 1 operation(s) read from 1 public documentation page(s) (each operation names its page in x-source). This is not the provider''s published contract; Oxford Nanopore Technologies has published no machine-readable contract that the pipeline could find. Engine: local.'
  x-evidence-tiers:
    code-example: 1
    documentation: 0
    pages-with-code: 1
    pages-read: 1
  x-generated-from: documentation
  x-provenance: generated
  x-authored-by: API Evangelist
  x-generated: '2026-10-14'
  x-generator: generate-contract-from-docs.py
  x-engine: local
  x-sources:
  - https://nanoporetech.com/resources/document-repository/document/24hr-genome-e2e
servers:
- url: https://ftp.ncbi.nlm.nih.gov
tags:
- name: Genomes
paths:
  ? /genomes/all/GCA/{gcaid}/{id}/{id}/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz
  : get:
      operationId: get_genomes_all_GCA_gcaid_id_id_GCA_000001405_15_GRCh38_seqs_for_alignment_pipel
      tags:
      - Genomes
      summary: GET /genomes/all/GCA/{gcaId}/{id}/{id}/GCA_000001405.15_GRCh38/seqs_for_alignmen…
      x-source: https://nanoporetech.com/resources/document-repository/document/24hr-genome-e2e
      parameters:
      - name: gcaid
        in: path
        required: true
        schema:
          type: string
      - name: id
        in: path
        required: true
        schema:
          type: string
      - name: id
        in: path
        required: true
        schema:
          type: string
      responses:
        '200':
          description: Success (status as documented)
      x-evidence:
        kind: code-example
        language: curl
        snippet: 'curl -O https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/405/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz Uncompress: gunzip GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz Move it to the references directory: mv GCA_000001405.15_GRCh38_no_alt_analysis_set.fna ~/data/reference Run setup For trio workflows, set up and run th'