Galatea Bio

Galatea Bio Organizations API

The organizations API from Galatea Bio — 13 operation(s) for organizations.

GitHub OpenAPI

Operations 17

GET /organizations #
POST /organizations #
GET /organizations/sftp_users_sync #
PUT /organizations/{organization_id} #
POST /organizations/{organization_id}/generate-api-key #
POST /organizations/{organization_id}/generate-webhooks-secret #
GET /organizations/{organization_id}/models #
POST /organizations/{organization_id}/models #
POST /organizations/{organization_id}/models_permissions #
GET /organizations/{organization_id}/sftp_users #
POST /organizations/{organization_id}/sftp_users #
DELETE /organizations/{organization_id}/sftp_users/{sftp_user_id} #
POST /organizations/{organization_id}/sftp_users/{sftp_user_id}/ssh_keys #
DELETE /organizations/{organization_id}/sftp_users/{sftp_user_id}/ssh_keys/{ssh_key_id} #
GET /organizations/{organization_id}/webhooks-info #
POST /organizations/{organization_id}/webhooks-info #
POST /organizations/{organization_id}/webhooks/{webhook_id}/test #

Documentation

📖
Documentation
https://docs.galatea.bio/
📖
APIReference
https://docs.galatea.bio/#api-reference-contents
📖
Authentication
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/authentication/galatea-bio-authentication.yml

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/openapi/galatea-bio-organizations-api-openapi.yml

Other Resources

🔗
Swagger
https://api.galatea.bio/swagger/
🔗
Conventions
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/conventions/galatea-bio-conventions.yml
🔗
ErrorCatalog
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/errors/galatea-bio-problem-types.yml
🔗
DataModel
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/data-model/galatea-bio-data-model.yml
🔗
Webhooks
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/asyncapi/galatea-bio-octopod-webhooks.yml
🔗
Sandbox
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/sandbox/galatea-bio-sandbox.yml

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OpenAPI Specification

galatea-bio-organizations-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  title: Octopod Organizations API
  version: v1
servers:
- url: https://api.galatea.bio/api/v1
security:
- Bearer: []
tags:
- name: organizations
paths:
  /organizations:
    parameters: []
    get:
      operationId: organizations_list
      description: Get organizations
      parameters:
      - name: named_models
        in: query
        description: Search by named models
        required: false
        schema:
          type: array
          items:
            type: string
      - name: model_api_names
        in: query
        description: Search by model api name
        required: false
        schema:
          type: array
          items:
            type: string
            enum:
            - skywalker
            - hutt
            - palpatine
            - vader
            - mysterio
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Organizations list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - name
                  - home_folder_name
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    name:
                      title: Name
                      type: string
                      maxLength: 100
                      minLength: 1
                    domains:
                      description: comma separated list
                      type: array
                      items:
                        title: Domains
                        type: string
                        maxLength: 50
                        minLength: 1
                    home_folder_name:
                      title: Home folder name
                      type: string
                      maxLength: 128
                      minLength: 1
                    result_summary_group_set:
                      title: Result summary group set
                      type: string
                      readOnly: true
                    result_summary_chroms:
                      title: Result summary chroms
                      type: string
                      readOnly: true
                    result_detailed_group_set:
                      title: Result detailed group set
                      type: string
                      readOnly: true
                    result_detailed_chroms:
                      title: Result detailed chroms
                      type: string
                      readOnly: true
                    report_ancestry_enabled:
                      title: Report ancestry enabled
                      type: string
                      readOnly: true
                    report_prs_ruo_cardio_enabled:
                      title: Report prs ruo cardio enabled
                      type: string
                      readOnly: true
                    report_prs_ruo_cancer_enabled:
                      title: Report prs ruo cancer enabled
                      type: string
                      readOnly: true
                    report_prs_clinical_cardio_enabled:
                      title: Report prs clinical cardio enabled
                      type: string
                      readOnly: true
                    report_prs_clinical_cancer_enabled:
                      title: Report prs clinical cancer enabled
                      type: string
                      readOnly: true
                    mfa_enabled:
                      title: Mfa enabled
                      type: boolean
                    web_users_count:
                      title: Web users count
                      type: string
                      readOnly: true
                    sftp_users_count:
                      title: Sftp users count
                      type: string
                      readOnly: true
                    use_own_batch_queue:
                      title: Use own batch queue
                      type: boolean
                    batch_max_vcpu:
                      title: Batch max vcpu
                      type:
                      - integer
                      - 'null'
                      maximum: 2147483647
                      minimum: -2147483648
                    batch_job_queue:
                      title: Batch job queue
                      type: string
                      readOnly: true
                    quickbooks_enabled:
                      title: Quickbooks enabled
                      type: boolean
                    quickbooks_customer_id:
                      title: Quickbooks customer id
                      type:
                      - string
                      - 'null'
                    quickbooks_email:
                      title: Quickbooks email
                      type:
                      - string
                      - 'null'
                    webhooks_enabled:
                      title: Webhooks enabled
                      type: string
                      readOnly: true
                    webhooks_secret:
                      title: Webhooks secret
                      type: string
                      readOnly: true
      tags:
      - organizations
    post:
      operationId: organizations_create
      description: ''
      responses:
        '201':
          description: ''
      tags:
      - organizations
  /organizations/sftp_users_sync:
    parameters: []
    get:
      operationId: organizations_sftp_users_sync_list
      description: Sync sftp users
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: OK
      tags:
      - organizations
  /organizations/{organization_id}:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    put:
      operationId: organizations_update
      description: ''
      responses:
        '200':
          description: ''
      tags:
      - organizations
  /organizations/{organization_id}/generate-api-key:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    post:
      operationId: organizations_generate-api-key_create
      description: ''
      responses:
        '201':
          description: ''
      tags:
      - organizations
  /organizations/{organization_id}/generate-webhooks-secret:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    post:
      operationId: organizations_generate-webhooks-secret_create
      description: Generate new webhooks secret key
      parameters:
      - name: organization_id
        in: path
        description: Organization Id
        required: true
        schema:
          type: string
      responses:
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '200':
          description: New webhooks secret key
      tags:
      - organizations
  /organizations/{organization_id}/models:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    get:
      operationId: organizations_models_list
      description: Get available models for organization
      parameters:
      - name: organization_id
        in: path
        description: Organization Id
        required: true
        schema:
          type: string
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Entity list
          content:
            application/json:
              schema:
                type: array
                items:
                  type: object
                  properties:
                    model_name:
                      title: Model name
                      type: string
                      readOnly: true
                    model_api_name:
                      title: Model api name
                      type: string
                      readOnly: true
      tags:
      - organizations
    post:
      operationId: organizations_models_create
      description: ''
      responses:
        '201':
          description: ''
      tags:
      - organizations
  /organizations/{organization_id}/models_permissions:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    post:
      operationId: organizations_models_permissions_create
      description: Edit model permission of accessed named model by org
      responses:
        '400':
          description: Bad request
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '406':
          description: Not acceptable
        '201':
          description: Named model permissions are updated
          content:
            application/json:
              schema:
                required:
                - execution_results
                - post_execution_results
                type: object
                properties:
                  model_name:
                    title: Model name
                    type: string
                    readOnly: true
                  model_api_name:
                    title: Model api name
                    type: string
                    readOnly: true
                  execution_results:
                    type: object
                    properties:
                      result_sub_pop:
                        title: Result sub pop
                        type: boolean
                      result_sub_pop_chrm:
                        title: Result sub pop chrm
                        type: boolean
                      result_super_pop:
                        title: Result super pop
                        type: boolean
                      result_super_pop_chrm:
                        title: Result super pop chrm
                        type: boolean
                      result_svg_data:
                        title: Result svg data
                        type: boolean
                      result_prs_data:
                        title: Result prs data
                        type: boolean
                      result_prs_tech_data:
                        title: Result prs tech data
                        type: boolean
                      result_prs_qc:
                        title: Result prs qc
                        type: boolean
                  post_execution_results:
                    type: object
                    properties:
                      ancestry_pdf_report:
                        title: Ancestry pdf report
                        type: boolean
                      prs_ruo_cardio_pdf_report:
                        title: Prs ruo cardio pdf report
                        type: boolean
                      prs_ruo_cancer_pdf_report:
                        title: Prs ruo cancer pdf report
                        type: boolean
                      prs_clinical_cardio_pdf_report:
                        title: Prs clinical cardio pdf report
                        type: boolean
                      prs_clinical_cancer_pdf_report:
                        title: Prs clinical cancer pdf report
                        type: boolean
      tags:
      - organizations
      requestBody:
        content:
          application/json:
            schema:
              required:
              - models_permissions
              type: object
              properties:
                models_permissions:
                  type: array
                  items:
                    required:
                    - model_name
                    - execution_results
                    - post_execution_results
                    type: object
                    properties:
                      model_name:
                        title: Model name
                        type: string
                        minLength: 1
                      execution_results:
                        type:
                        - object
                        - 'null'
                        properties:
                          result_sub_pop:
                            title: Result sub pop
                            type: boolean
                          result_sub_pop_chrm:
                            title: Result sub pop chrm
                            type: boolean
                          result_super_pop:
                            title: Result super pop
                            type: boolean
                          result_super_pop_chrm:
                            title: Result super pop chrm
                            type: boolean
                          result_svg_data:
                            title: Result svg data
                            type: boolean
                          result_prs_data:
                            title: Result prs data
                            type: boolean
                          result_prs_tech_data:
                            title: Result prs tech data
                            type: boolean
                          result_prs_qc:
                            title: Result prs qc
                            type: boolean
                      post_execution_results:
                        type:
                        - object
                        - 'null'
                        properties:
                          ancestry_pdf_report:
                            title: Ancestry pdf report
                            type: boolean
                          prs_ruo_cardio_pdf_report:
                            title: Prs ruo cardio pdf report
                            type: boolean
                          prs_ruo_cancer_pdf_report:
                            title: Prs ruo cancer pdf report
                            type: boolean
                          prs_clinical_cardio_pdf_report:
                            title: Prs clinical cardio pdf report
                            type: boolean
                          prs_clinical_cancer_pdf_report:
                            title: Prs clinical cancer pdf report
                            type: boolean
        required: true
  /organizations/{organization_id}/sftp_users:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    get:
      operationId: organizations_sftp_users_list
      description: Get SFTP users of organization
      parameters:
      - name: organization_id
        in: path
        description: Organization ID
        required: true
        schema:
          type: string
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Entity list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - id
                  - user_name
                  - user_home_folder
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                    user_name:
                      title: User name
                      type: string
                      minLength: 1
                    user_home_folder:
                      title: User home folder
                      type: string
                      minLength: 1
                    connection_hint:
                      title: Connection hint
                      type: string
                      readOnly: true
                    ssh_keys:
                      title: Ssh keys
                      type: string
                      readOnly: true
      tags:
      - organizations
    post:
      operationId: organizations_sftp_users_create
      description: Create sftp user for organization
      responses:
        '400':
          description: '{"detail": "Bad request"}'
        '401':
          description: '{"detail": "Unauthorized request"}'
        '403':
          description: '{"detail": "Forbidden"}'
        '422':
          description: '{"detail": "Request cannot be processed"}'
        '200':
          description: Entity item
          content:
            application/json:
              schema:
                required:
                - id
                - user_name
                - user_home_folder
                type: object
                properties:
                  id:
                    title: Id
                    type: string
                    format: uuid
                  user_name:
                    title: User name
                    type: string
                    minLength: 1
                  user_home_folder:
                    title: User home folder
                    type: string
                    minLength: 1
                  connection_hint:
                    title: Connection hint
                    type: string
                    readOnly: true
                  ssh_keys:
                    title: Ssh keys
                    type: string
                    readOnly: true
      tags:
      - organizations
      requestBody:
        content:
          application/json:
            schema:
              type: object
              properties:
                ssh_public_body_key:
                  title: Ssh public body key
                  type: string
                  default: ''
                  minLength: 1
        required: true
  /organizations/{organization_id}/sftp_users/{sftp_user_id}:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    - name: sftp_user_id
      in: path
      required: true
      schema:
        type: string
    delete:
      operationId: organizations_sftp_users_delete
      description: Delete SFTP user of organization
      parameters:
      - name: organization_id
        in: path
        description: Organization ID
        required: true
        schema:
          type: string
      - name: sftp_user_id
        in: path
        description: SFTP user ID
        required: true
        schema:
          type: string
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Success
      tags:
      - organizations
  /organizations/{organization_id}/sftp_users/{sftp_user_id}/ssh_keys:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    - name: sftp_user_id
      in: path
      required: true
      schema:
        type: string
    post:
      operationId: organizations_sftp_users_ssh_keys_create
      description: Add ssh key to sftp user
      responses:
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '406':
          description: Not acceptable
        '200':
          description: Entity item
          content:
            application/json:
              schema:
                required:
                - id
                - user_name
                - user_home_folder
                type: object
                properties:
                  id:
                    title: Id
                    type: string
                    format: uuid
                  user_name:
                    title: User name
                    type: string
                    minLength: 1
                  user_home_folder:
                    title: User home folder
                    type: string
                    minLength: 1
                  connection_hint:
                    title: Connection hint
                    type: string
                    readOnly: true
                  ssh_keys:
                    title: Ssh keys
                    type: string
                    readOnly: true
      tags:
      - organizations
      requestBody:
        content:
          application/json:
            schema:
              type: object
              properties:
                ssh_public_body_key:
                  title: Ssh public body key
                  type: string
                  default: ''
                  minLength: 1
        required: true
  /organizations/{organization_id}/sftp_users/{sftp_user_id}/ssh_keys/{ssh_key_id}:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    - name: sftp_user_id
      in: path
      required: true
      schema:
        type: string
    - name: ssh_key_id
      in: path
      required: true
      schema:
        type: string
    delete:
      operationId: organizations_sftp_users_ssh_keys_delete
      description: Delete ssh key from sftp user
      responses:
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '406':
          description: Not acceptable
        '200':
          description: Entity item
          content:
            application/json:
              schema:
                required:
                - id
                - user_name
                - user_home_folder
                type: object
                properties:
                  id:
                    title: Id
                    type: string
                    format: uuid
                  user_name:
                    title: User name
                    type: string
                    minLength: 1
                  user_home_folder:
                    title: User home folder
                    type: string
                    minLength: 1
                  connection_hint:
                    title: Connection hint
                    type: string
                    readOnly: true
                  ssh_keys:
                    title: Ssh keys
                    type: string
                    readOnly: true
      tags:
      - organizations
  /organizations/{organization_id}/webhooks-info:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    get:
      operationId: organizations_webhooks-info_list
      description: Get organization webhooks information
      parameters:
      - name: organization_id
        in: path
        description: Organization Id
        required: true
        schema:
          type: string
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Webhooks information
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - webhook_action
                  - remote_endpoint
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    org_id:
                      title: Org id
                      type: string
                      readOnly: true
                    webhook_action:
                      title: Webhook action
                      type: string
                      enum:
                      - order_moved_to_completed_state
                      - source_file_validation_completed
                    remote_endpoint:
                      title: Remote endpoint
                      type: string
                      minLength: 1
                    max_retries_count:
                      title: Max retries count
                      type: string
                      readOnly: true
                    save_error_in_notifications:
                      title: Save error in notifications
                      type: boolean
                    created_at:
                      title: Created at
                      type: string
                      format: date-time
                      readOnly: true
      tags:
      - organizations
    post:
      operationId: organizations_webhooks-info_create
      description: Edit organization webhooks information
      parameters:
      - name: organization_id
        in: path
        description: Organization Id
        required: true
        schema:
          type: string
      responses:
        '400':
          description: Bad request
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '202':
          description: Webhooks information
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - webhook_action
                  - remote_endpoint
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    org_id:
                      title: Org id
                      type: string
                      readOnly: true
                    webhook_action:
                      title: Webhook action
                      type: string
                      enum:
                      - order_moved_to_completed_state
                      - source_file_validation_completed
                    remote_endpoint:
                      title: Remote endpoint
                      type: string
                      minLength: 1
                    max_retries_count:
                      title: Max retries count
                      type: string
                      readOnly: true
                    save_error_in_notifications:
                      title: Save error in notifications
                      type: boolean
                    created_at:
                      title: Created at
                      type: string
                      format: date-time
                      readOnly: true
      tags:
      - organizations
      requestBody:
        content:
          application/json:
            schema:
              type: array
              items:
                required:
                - id
                - webhook_action
                - remote_endpoint
                - max_retries_count
                - save_error_in_notifications
                type: object
                properties:
                  id:
                    title: Id
                    type:
                    - string
                    - 'null'
                    format: uuid
                  webhook_action:
                    title: Webhook action
                    type: string
                    enum:
                    - order_moved_to_completed_state
                    - source_file_validation_completed
                  remote_endpoint:
                    title: Remote endpoint
                    type: string
                    minLength: 1
                  max_retries_count:
                    title: Max retries count
                    type: integer
                    maximum: 10
                    minimum: 1
                  save_error_in_notifications:
                    title: Save error in notifications
                    type: boolean
        required: true
  /organizations/{organization_id}/webhooks/{webhook_id}/test:
    parameters:
    - name: organization_id
      in: path
      required: true
      schema:
        type: string
    - name: webhook_id
      in: path
      required: true
      schema:
        type: string
    post:
      operationId: organizations_webhooks_test_create
      description: Test organization webhooks
      parameters:
      - name: organization_id
        in: path
        description: Organization Id
        required: true
        schema:
          type: string
      - name: webhook_id
        in: path
        description: Webhook Id
        required: true
        schema:
          type: string
      responses:
        '400':
          description: Bad request
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '202':
          description: Webhooks information
      tags:
      - organizations
components:
  securitySchemes:
    Bearer:
      type: apiKey
      name: Authorization
      in: header