Galatea Bio

Galatea Bio Exec API

The exec API from Galatea Bio — 11 operation(s) for exec.

GitHub OpenAPI

Operations 18

POST /exec/cancel #
GET /exec/model #
POST /exec/model #
GET /exec/model/api #
GET /exec/model/ecr #
POST /exec/model/ecr #
GET /exec/named_model #
POST /exec/named_model #
PUT /exec/named_model/{named_model_id} #
GET /exec/named_model/{named_model_id}/history #
GET /exec/orders #
POST /exec/orders #
PATCH /exec/orders/{order_id} #
GET /exec/tags #
POST /exec/tags #
GET /exec/tags/{tag_id} #
PUT /exec/tags/{tag_id} #
DELETE /exec/tags/{tag_id} #

Documentation

📖
Documentation
https://docs.galatea.bio/
📖
APIReference
https://docs.galatea.bio/#api-reference-contents
📖
Authentication
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/authentication/galatea-bio-authentication.yml

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/openapi/galatea-bio-exec-api-openapi.yml

Other Resources

🔗
Swagger
https://api.galatea.bio/swagger/
🔗
Conventions
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/conventions/galatea-bio-conventions.yml
🔗
ErrorCatalog
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/errors/galatea-bio-problem-types.yml
🔗
DataModel
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/data-model/galatea-bio-data-model.yml
🔗
Webhooks
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/asyncapi/galatea-bio-octopod-webhooks.yml
🔗
Sandbox
https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/sandbox/galatea-bio-sandbox.yml

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OpenAPI Specification

galatea-bio-exec-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  title: Octopod Exec API
  version: v1
servers:
- url: https://api.galatea.bio/api/v1
security:
- Bearer: []
tags:
- name: exec
paths:
  /exec/cancel:
    parameters: []
    post:
      operationId: exec_cancel_create
      description: Cancel model execution which is in queue
      responses:
        '400':
          description: '{"detail": "Bad request"}'
        '401':
          description: '{"detail": "Unauthorized request"}'
        '403':
          description: '{"detail": "Forbidden"}'
        '200':
          description: '{"detail": "Request to cancel execution id UUID accepted"}'
      tags:
      - exec
      requestBody:
        content:
          application/json:
            schema:
              type: object
              properties:
                order_id:
                  description: Execution order ID
                  type: string
              in: body
        required: true
  /exec/model:
    parameters: []
    get:
      operationId: exec_model_list
      description: Get Execution models list
      parameters:
      - name: model_id
        in: query
        description: Model ID for search
        required: false
        schema:
          type: string
      - name: image_tag
        in: query
        description: Search by image tag
        required: false
        schema:
          type: string
      - name: model_api_names
        in: query
        description: Search by model api name
        required: false
        schema:
          type: array
          items:
            type: string
            enum:
            - skywalker
            - hutt
            - palpatine
            - vader
            - mysterio
      - name: named_models
        in: query
        description: Search by named models
        required: false
        schema:
          type: array
          items:
            type: string
      - name: is_sandbox
        in: query
        description: Search for sandbox models
        required: false
        schema:
          type: boolean
      - name: push_date
        in: query
        description: Search by push date
        required: false
        example: '2025-01-25'
        schema:
          type: string
          format: date
      - name: clinical_validated
        in: query
        description: Search for clinical validated models
        required: false
        schema:
          type: boolean
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Execution models list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - model_api_name
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    image_tag:
                      title: Image tag
                      type: string
                      readOnly: true
                    full_image_tag:
                      title: Full image tag
                      type: string
                      readOnly: true
                    model_api_name:
                      title: Model api name
                      type: string
                      enum:
                      - skywalker
                      - hutt
                      - palpatine
                      - vader
                      - mysterio
                      - check_source
                    image_pushed_at:
                      title: Image pushed at
                      type:
                      - string
                      - 'null'
                      format: date-time
                    image_digest:
                      title: Image digest
                      type:
                      - string
                      - 'null'
                      maxLength: 300
                    created_at:
                      title: Created at
                      type: string
                      format: date-time
                      readOnly: true
                    assigned_name:
                      title: Assigned name
                      type: string
                      readOnly: true
                    git_commit:
                      title: Git commit
                      type: string
                      readOnly: true
                    clinical_validated:
                      title: Clinical validated
                      type: boolean
                    validated_at:
                      title: Validated at
                      type:
                      - string
                      - 'null'
                      format: date-time
                    validated_by:
                      title: Validated by
                      type:
                      - string
                      - 'null'
                      maxLength: 50
                    description:
                      title: Description
                      type:
                      - string
                      - 'null'
                      maxLength: 500
                    execution_results:
                      title: Execution results
                      type: string
                      readOnly: true
                    post_execution_results:
                      title: Post execution results
                      type: string
                      readOnly: true
                    is_sandbox:
                      title: Is sandbox
                      type: boolean
      tags:
      - exec
    post:
      operationId: exec_model_create
      description: Create model
      responses:
        '400':
          description: Bad request
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '406':
          description: Not acceptable
        '201':
          description: New model
          content:
            application/json:
              schema:
                required:
                - model_api_name
                type: object
                properties:
                  id:
                    title: Id
                    type: string
                    format: uuid
                    readOnly: true
                  image_tag:
                    title: Image tag
                    type: string
                    readOnly: true
                  full_image_tag:
                    title: Full image tag
                    type: string
                    readOnly: true
                  model_api_name:
                    title: Model api name
                    type: string
                    enum:
                    - skywalker
                    - hutt
                    - palpatine
                    - vader
                    - mysterio
                    - check_source
                  image_pushed_at:
                    title: Image pushed at
                    type:
                    - string
                    - 'null'
                    format: date-time
                  image_digest:
                    title: Image digest
                    type:
                    - string
                    - 'null'
                    maxLength: 300
                  created_at:
                    title: Created at
                    type: string
                    format: date-time
                    readOnly: true
                  assigned_name:
                    title: Assigned name
                    type: string
                    readOnly: true
                  git_commit:
                    title: Git commit
                    type: string
                    readOnly: true
                  clinical_validated:
                    title: Clinical validated
                    type: boolean
                  validated_at:
                    title: Validated at
                    type:
                    - string
                    - 'null'
                    format: date-time
                  validated_by:
                    title: Validated by
                    type:
                    - string
                    - 'null'
                    maxLength: 50
                  description:
                    title: Description
                    type:
                    - string
                    - 'null'
                    maxLength: 500
                  execution_results:
                    title: Execution results
                    type: string
                    readOnly: true
                  post_execution_results:
                    title: Post execution results
                    type: string
                    readOnly: true
                  is_sandbox:
                    title: Is sandbox
                    type: boolean
      tags:
      - exec
      requestBody:
        content:
          application/json:
            schema:
              required:
              - ecr_image_id
              - model_api_name
              type: object
              properties:
                ecr_image_id:
                  title: Ecr image id
                  type: string
                  format: uuid
                model_api_name:
                  title: Model api name
                  type: string
                  enum:
                  - skywalker
                  - hutt
                  - palpatine
                  - vader
                  - mysterio
                  - check_source
                description:
                  title: Description
                  type: string
                  minLength: 1
        required: true
  /exec/model/api:
    parameters: []
    get:
      operationId: exec_model_api_list
      description: Get model's API
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Model's API list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - label
                  - value
                  - execution_results
                  type: object
                  properties:
                    label:
                      title: Label
                      type: string
                      minLength: 1
                    value:
                      title: Value
                      type: string
                      minLength: 1
                    execution_results:
                      title: Execution results
                      type: object
                      additionalProperties:
                        type:
                        - string
                        - 'null'
      tags:
      - exec
  /exec/model/ecr:
    parameters: []
    get:
      operationId: exec_model_ecr_list
      description: Get ECR images
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: ECR images list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - image_registry
                  - image_repository
                  - image_tag
                  - image_digest
                  - image_pushed_at
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    image_registry:
                      title: Image registry
                      type: string
                      minLength: 1
                    image_repository:
                      title: Image repository
                      type: string
                      minLength: 1
                    image_tag:
                      title: Image tag
                      type: string
                      minLength: 1
                    image_digest:
                      title: Image digest
                      type: string
                      minLength: 1
                    image_pushed_at:
                      title: Image pushed at
                      type: string
                      format: date-time
                    image_models:
                      title: Image models
                      type: string
                      readOnly: true
      tags:
      - exec
    post:
      operationId: exec_model_ecr_create
      description: Update ECR images list
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: ECR images list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - image_registry
                  - image_repository
                  - image_tag
                  - image_digest
                  - image_pushed_at
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    image_registry:
                      title: Image registry
                      type: string
                      minLength: 1
                    image_repository:
                      title: Image repository
                      type: string
                      minLength: 1
                    image_tag:
                      title: Image tag
                      type: string
                      minLength: 1
                    image_digest:
                      title: Image digest
                      type: string
                      minLength: 1
                    image_pushed_at:
                      title: Image pushed at
                      type: string
                      format: date-time
                    image_models:
                      title: Image models
                      type: string
                      readOnly: true
      tags:
      - exec
  /exec/named_model:
    parameters: []
    get:
      operationId: exec_named_model_list
      description: Get named models
      parameters:
      - name: hide_deprecated
        in: query
        description: Hide deprecated models
        required: false
        schema:
          type: boolean
      - name: model_api_names
        in: query
        description: Search by model api name
        required: false
        schema:
          type: array
          items:
            type: string
            enum:
            - skywalker
            - hutt
            - palpatine
            - vader
            - mysterio
      - name: named_model
        in: query
        description: Search by model name
        required: false
        schema:
          type: string
      - name: exact_search
        in: query
        description: search by model name exactly
        required: false
        schema:
          type: boolean
      - name: image_tag
        in: query
        description: Search by image tag
        required: false
        schema:
          type: string
      - name: is_sandbox
        in: query
        description: Search for sandbox models
        required: false
        schema:
          type: boolean
      - name: clinical_validated
        in: query
        description: Search for clinical validated models
        required: false
        schema:
          type: boolean
      - name: enabled
        in: query
        description: Search for enabled models
        required: false
        schema:
          type: boolean
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Named models list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - model_name
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    model_id:
                      title: Model id
                      type: string
                      readOnly: true
                    model_name:
                      title: Model name
                      type: string
                      maxLength: 100
                      minLength: 1
                    model_api_name:
                      title: Model api name
                      type: string
                      readOnly: true
                    model_image_tag:
                      title: Model image tag
                      type: string
                      readOnly: true
                    deprecated:
                      title: Deprecated
                      type: boolean
                    clinical_validated:
                      title: Clinical validated
                      type: boolean
                    validated_at:
                      title: Validated at
                      type:
                      - string
                      - 'null'
                      format: date-time
                    validated_by:
                      title: Validated by
                      type:
                      - string
                      - 'null'
                      maxLength: 50
                      minLength: 1
                    enabled:
                      title: Enabled
                      type: boolean
                    execution_results:
                      title: Execution results
                      type: string
                      readOnly: true
                    post_execution_results:
                      title: Post execution results
                      type: string
                      readOnly: true
                    used_in_orgs:
                      title: Used in orgs
                      type: string
                      readOnly: true
                    is_sandbox:
                      title: Is sandbox
                      type: string
                      readOnly: true
                    comment:
                      title: Comment
                      type:
                      - string
                      - 'null'
                      maxLength: 1000
                      minLength: 1
      tags:
      - exec
    post:
      operationId: exec_named_model_create
      description: Create named model
      responses:
        '400':
          description: Bad request
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '406':
          description: Not acceptable
        '201':
          description: New named model
          content:
            application/json:
              schema:
                required:
                - model_name
                type: object
                properties:
                  id:
                    title: Id
                    type: string
                    format: uuid
                    readOnly: true
                  model_id:
                    title: Model id
                    type: string
                    readOnly: true
                  model_name:
                    title: Model name
                    type: string
                    maxLength: 100
                    minLength: 1
                  model_api_name:
                    title: Model api name
                    type: string
                    readOnly: true
                  model_image_tag:
                    title: Model image tag
                    type: string
                    readOnly: true
                  deprecated:
                    title: Deprecated
                    type: boolean
                  clinical_validated:
                    title: Clinical validated
                    type: boolean
                  validated_at:
                    title: Validated at
                    type:
                    - string
                    - 'null'
                    format: date-time
                  validated_by:
                    title: Validated by
                    type:
                    - string
                    - 'null'
                    maxLength: 50
                    minLength: 1
                  enabled:
                    title: Enabled
                    type: boolean
                  execution_results:
                    title: Execution results
                    type: string
                    readOnly: true
                  post_execution_results:
                    title: Post execution results
                    type: string
                    readOnly: true
                  used_in_orgs:
                    title: Used in orgs
                    type: string
                    readOnly: true
                  is_sandbox:
                    title: Is sandbox
                    type: string
                    readOnly: true
                  comment:
                    title: Comment
                    type:
                    - string
                    - 'null'
                    maxLength: 1000
                    minLength: 1
      tags:
      - exec
      requestBody:
        content:
          application/json:
            schema:
              required:
              - model_name
              - model_id
              - execution_results
              - post_execution_results
              - enabled
              type: object
              properties:
                model_name:
                  title: Model name
                  type: string
                  minLength: 1
                model_id:
                  title: Model id
                  type: string
                  format: uuid
                execution_results:
                  type: object
                  properties:
                    result_sub_pop:
                      title: Result sub pop
                      type: boolean
                    result_sub_pop_chrm:
                      title: Result sub pop chrm
                      type: boolean
                    result_super_pop:
                      title: Result super pop
                      type: boolean
                    result_super_pop_chrm:
                      title: Result super pop chrm
                      type: boolean
                    result_svg_data:
                      title: Result svg data
                      type: boolean
                    result_prs_data:
                      title: Result prs data
                      type: boolean
                    result_prs_tech_data:
                      title: Result prs tech data
                      type: boolean
                    result_prs_qc:
                      title: Result prs qc
                      type: boolean
                post_execution_results:
                  type: object
                  properties:
                    ancestry_pdf_report:
                      title: Ancestry pdf report
                      type: boolean
                    prs_ruo_cardio_pdf_report:
                      title: Prs ruo cardio pdf report
                      type: boolean
                    prs_ruo_cancer_pdf_report:
                      title: Prs ruo cancer pdf report
                      type: boolean
                    prs_clinical_cardio_pdf_report:
                      title: Prs clinical cardio pdf report
                      type: boolean
                    prs_clinical_cancer_pdf_report:
                      title: Prs clinical cancer pdf report
                      type: boolean
                enabled:
                  title: Enabled
                  type: boolean
                comment:
                  title: Comment
                  type:
                  - string
                  - 'null'
                clinical_validated:
                  title: Clinical validated
                  type: boolean
        required: true
  /exec/named_model/{named_model_id}:
    parameters:
    - name: named_model_id
      in: path
      required: true
      schema:
        type: string
    put:
      operationId: exec_named_model_update
      description: Edit named model
      responses:
        '400':
          description: Bad request
        '401':
          description: Unauthorized request
        '403':
          description: Forbidden
        '406':
          description: Not acceptable
        '201':
          description: Edit named model
          content:
            application/json:
              schema:
                required:
                - model_name
                type: object
                properties:
                  id:
                    title: Id
                    type: string
                    format: uuid
                    readOnly: true
                  model_id:
                    title: Model id
                    type: string
                    readOnly: true
                  model_name:
                    title: Model name
                    type: string
                    maxLength: 100
                    minLength: 1
                  model_api_name:
                    title: Model api name
                    type: string
                    readOnly: true
                  model_image_tag:
                    title: Model image tag
                    type: string
                    readOnly: true
                  deprecated:
                    title: Deprecated
                    type: boolean
                  clinical_validated:
                    title: Clinical validated
                    type: boolean
                  validated_at:
                    title: Validated at
                    type:
                    - string
                    - 'null'
                    format: date-time
                  validated_by:
                    title: Validated by
                    type:
                    - string
                    - 'null'
                    maxLength: 50
                    minLength: 1
                  enabled:
                    title: Enabled
                    type: boolean
                  execution_results:
                    title: Execution results
                    type: string
                    readOnly: true
                  post_execution_results:
                    title: Post execution results
                    type: string
                    readOnly: true
                  used_in_orgs:
                    title: Used in orgs
                    type: string
                    readOnly: true
                  is_sandbox:
                    title: Is sandbox
                    type: string
                    readOnly: true
                  comment:
                    title: Comment
                    type:
                    - string
                    - 'null'
                    maxLength: 1000
                    minLength: 1
      tags:
      - exec
      requestBody:
        content:
          application/json:
            schema:
              required:
              - model_name
              - model_id
              - execution_results
              - post_execution_results
              - enabled
              type: object
              properties:
                model_name:
                  title: Model name
                  type: string
                  minLength: 1
                model_id:
                  title: Model id
                  type: string
                  format: uuid
                execution_results:
                  type: object
                  properties:
                    result_sub_pop:
                      title: Result sub pop
                      type: boolean
                    result_sub_pop_chrm:
                      title: Result sub pop chrm
                      type: boolean
                    result_super_pop:
                      title: Result super pop
                      type: boolean
                    result_super_pop_chrm:
                      title: Result super pop chrm
                      type: boolean
                    result_svg_data:
                      title: Result svg data
                      type: boolean
                    result_prs_data:
                      title: Result prs data
                      type: boolean
                    result_prs_tech_data:
                      title: Result prs tech data
                      type: boolean
                    result_prs_qc:
                      title: Result prs qc
                      type: boolean
                post_execution_results:
                  type: object
                  properties:
                    ancestry_pdf_report:
                      title: Ancestry pdf report
                      type: boolean
                    prs_ruo_cardio_pdf_report:
                      title: Prs ruo cardio pdf report
                      type: boolean
                    prs_ruo_cancer_pdf_report:
                      title: Prs ruo cancer pdf report
                      type: boolean
                    prs_clinical_cardio_pdf_report:
                      title: Prs clinical cardio pdf report
                      type: boolean
                    prs_clinical_cancer_pdf_report:
                      title: Prs clinical cancer pdf report
                      type: boolean
                enabled:
                  title: Enabled
                  type: boolean
                comment:
                  title: Comment
                  type:
                  - string
                  - 'null'
                clinical_validated:
                  title: Clinical validated
                  type: boolean
        required: true
  /exec/named_model/{named_model_id}/history:
    parameters:
    - name: named_model_id
      in: path
      required: true
      schema:
        type: string
    get:
      operationId: exec_named_model_history_list
      description: Get named models
      responses:
        '401':
          description: unauthorized
        '403':
          description: forbidden
        '200':
          description: Named models history list
          content:
            application/json:
              schema:
                type: array
                items:
                  required:
                  - history_id
                  - model_name
                  type: object
                  properties:
                    id:
                      title: Id
                      type: string
                      format: uuid
                      readOnly: true
                    history_id:
                      title: History id
                      type: integer
                      maximum: 2147483647
                      minimum: -2147483648
                    model_id:
                      title: Model id
                      type: string
                      format: uuid
                      readOnly: true
                    model_name:
                      title: Model name
                      type: string
                      maxLength: 100
                      minLength: 1
                    model_api_name:
                      title: Model api name
                      type: string
                      readOnly: true
                    model_image_tag:
                      title: Model image tag
                      type: string
                      readOnly: true
                    deprecated:
                      title: Deprecated
                      type: boolean
                    clinical_validated:
                      title: Clinical validated
                      type: boolean
                    validated_at:
                      title: Validated at
                      type:
                      - string
                      - 'null'
                      format: date-time
                    validated_by:
                      title: Validated by
                      type:
                      - string
                      - 'null'
                      maxLength: 50
                      minLength: 1
                    enabled:
                      title: Enabled
                      type: boolean
                 

# --- truncated at 32 KB (49 KB total) ---
# Full source: https://raw.githubusercontent.com/api-evangelist/galatea-bio/refs/heads/main/openapi/galatea-bio-exec-api-openapi.yml