Benchling Tasks API

openapi: 3.0.1
info:
  license:
    name: Apache 2.0
    url: http://www.apache.org/licenses/LICENSE-2.0.html
  title: Benchling AA Sequences Tasks API
  version: 2.0.0
  description: 'AA Sequences are the working units of cells that make everything run (they help make structures, catalyze reactions and allow for signaling - a kind of internal cell communication). On Benchling, these are comprised of a string of amino acids and collections of other attributes, such as annotations.

    '
servers:
- url: /api/v2
security:
- oAuth: []
- basicApiKeyAuth: []
tags:
- description: '

    Endpoints that perform expensive computations launch long-running tasks. These endpoints return the task ID (a UUID) in the response body.


    After launching a task, periodically invoke the [Get a task](#/Tasks/getTask) endpoint with the task UUID (e.g., every 10 seconds), until the status is no longer RUNNING.


    You can access a task for up to 30 minutes after its completion, after which its data will no longer be available.

    '
  name: Tasks
paths:
  /tasks/{task_id}:
    get:
      description: Get a task by id
      operationId: getTask
      parameters:
      - description: UUID of the task
        example: f438d656-c2c3-40a4-b3fd-d7e58db78242
        in: path
        name: task_id
        required: true
        schema:
          type: string
      responses:
        '200':
          content:
            application/json:
              examples:
                AA Sequences - Bulk Create:
                  $ref: '#/components/examples/BulkOperateAaSequencesTaskResponse'
                AA Sequences - Bulk Update:
                  $ref: '#/components/examples/BulkOperateAaSequencesTaskResponse'
                AA Sequences - Find Matching Region:
                  $ref: '#/components/examples/AaSequencesFindMatchingRegionTaskResponse'
                Audit - Export Audit Log:
                  $ref: '#/components/examples/AuditLogTaskResponse'
                Containers - Bulk Create:
                  $ref: '#/components/examples/BulkOperateContainersTaskResponse'
                Containers - Bulk Update:
                  $ref: '#/components/examples/BulkOperateContainersTaskResponse'
                Containers - Transfers:
                  $ref: '#/components/examples/TransfersTaskResponse'
                Custom Entities - Bulk Create:
                  $ref: '#/components/examples/BulkOperateCustomEntitiesTaskResponse'
                Custom Entities - Bulk Update:
                  $ref: '#/components/examples/BulkOperateCustomEntitiesTaskResponse'
                DNA Alignments - Create Consensus Alignment:
                  $ref: '#/components/examples/DnaCreateAlignmentTaskResponse'
                DNA Alignments - Create Template Alignment:
                  $ref: '#/components/examples/DnaCreateAlignmentTaskResponse'
                DNA Oligos - Bulk Create:
                  $ref: '#/components/examples/BulkOperateDnaOligosTaskResponse'
                DNA Oligos - Bulk Update:
                  $ref: '#/components/examples/BulkOperateDnaOligosTaskResponse'
                DNA Sequences - Auto Annotate:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                DNA Sequences - Autofill Parts:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                DNA Sequences - Autofill Transcriptions:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                DNA Sequences - Autofill Translations:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                DNA Sequences - Bulk Create:
                  $ref: '#/components/examples/BulkOperateDnaSequencesTaskResponse'
                DNA Sequences - Bulk Update:
                  $ref: '#/components/examples/BulkOperateDnaSequencesTaskResponse'
                Exports - Export Item:
                  $ref: '#/components/examples/ExportsTaskResponse'
                Features - Bulk Create:
                  $ref: '#/components/examples/BulkOperateFeaturesTaskResponse'
                Lab Automation - Generate Input:
                  $ref: '#/components/examples/AIGGenerateInputTaskResponse'
                Lab Automation - Process Output:
                  $ref: '#/components/examples/AOPProcessOutputTaskResponse'
                RNA Oligos - Bulk Create:
                  $ref: '#/components/examples/BulkOperateRnaOligosTaskResponse'
                RNA Oligos - Bulk Update:
                  $ref: '#/components/examples/BulkOperateRnaOligosTaskResponse'
                RNA Sequences - Auto Annotate:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                RNA Sequences - Autofill Parts:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                RNA Sequences - Autofill Translations:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                RNA Sequences - Bulk Create:
                  $ref: '#/components/examples/BulkOperateRnaSequencesTaskResponse'
                RNA Sequences - Bulk Update:
                  $ref: '#/components/examples/BulkOperateRnaSequencesTaskResponse'
                Registry - Bulk Register Entities:
                  $ref: '#/components/examples/EmptySuccessTaskResponse'
                Task Failed:
                  $ref: '#/components/examples/TaskFailed'
                Task Failed (Bulk):
                  $ref: '#/components/examples/BulkTaskFailed'
                Task Running:
                  $ref: '#/components/examples/TaskRunning'
              schema:
                oneOf:
                - $ref: '#/components/schemas/AsyncTask'
                - $ref: '#/components/schemas/CreateTemplateAlignmentAsyncTask'
                - $ref: '#/components/schemas/CreateConsensusAlignmentAsyncTask'
                - $ref: '#/components/schemas/CreateNucleotideTemplateAlignmentAsyncTask'
                - $ref: '#/components/schemas/CreateNucleotideConsensusAlignmentAsyncTask'
                - $ref: '#/components/schemas/BulkCreateDnaSequencesAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateDnaSequencesAsyncTask'
                - $ref: '#/components/schemas/BulkCreateRnaSequencesAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateRnaSequencesAsyncTask'
                - $ref: '#/components/schemas/AutofillPartsAsyncTask'
                - $ref: '#/components/schemas/AutofillTranscriptionsAsyncTask'
                - $ref: '#/components/schemas/AutofillTranslationsAsyncTask'
                - $ref: '#/components/schemas/BulkRegisterEntitiesAsyncTask'
                - $ref: '#/components/schemas/BulkCreateDnaOligosAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateDnaOligosAsyncTask'
                - $ref: '#/components/schemas/BulkCreateRnaOligosAsyncTask'
                - $ref: '#/components/schemas/BulkCreateAaSequencesAsyncTask'
                - $ref: '#/components/schemas/BulkCreateCustomEntitiesAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateCustomEntitiesAsyncTask'
                - $ref: '#/components/schemas/BulkCreateContainersAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateContainersAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateAaSequencesAsyncTask'
                - $ref: '#/components/schemas/BulkUpdateRnaOligosAsyncTask'
                - $ref: '#/components/schemas/TransfersAsyncTask'
                - $ref: '#/components/schemas/AOPProcessOutputAsyncTask'
                - $ref: '#/components/schemas/AIGGenerateInputAsyncTask'
                - $ref: '#/components/schemas/ExportsAsyncTask'
                - $ref: '#/components/schemas/ExportAuditLogAsyncTask'
                - $ref: '#/components/schemas/BulkCreateFeaturesAsyncTask'
                - $ref: '#/components/schemas/FindMatchingRegionsAsyncTask'
                - $ref: '#/components/schemas/FindMatchingRegionsDnaAsyncTask'
          description: OK
        '404':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/NotFoundError'
          description: Not Found
      summary: Get a task by id
      tags:
      - Tasks
components:
  schemas:
    Primer:
      properties:
        bases:
          readOnly: true
          type: string
        bindPosition:
          readOnly: true
          type: integer
        color:
          readOnly: true
          type: string
        end:
          description: 0-based exclusive end index. The end of the sequence is always represented as 0.
          type: integer
        name:
          readOnly: true
          type: string
        oligoId:
          type: string
        overhangLength:
          readOnly: true
          type: integer
        start:
          description: 0-based inclusive start index.
          type: integer
        strand:
          example: 1
          type: integer
      type: object
    DeprecatedContainerVolumeForResponse:
      allOf:
      - $ref: '#/components/schemas/ContainerQuantity'
      - description: 'The deprecated "volume" type key in API responses can also contain non-volume quantities for back-compatibility purposes. Use the "quantity" type key instead.

          '
    ExperimentalWellRole:
      properties:
        group:
          type: integer
        primaryRole:
          enum:
          - SAMPLE
          - CONTROL
          - STANDARD
          - BLANK
          type: string
        subrole:
          nullable: true
          type: string
      type: object
    ArchiveRecord:
      properties:
        reason:
          example: Made in error
          type: string
      type: object
    BulkUpdateAaSequencesAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response:
            properties:
              AaSequences:
                items:
                  $ref: '#/components/schemas/AaSequence'
                type: array
            type: object
        type: object
      type: object
    CreateNucleotideTemplateAlignmentAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response:
            $ref: '#/components/schemas/NucleotideAlignment'
        type: object
      type: object
    FieldType:
      enum:
      - dna_sequence_link
      - aa_sequence_link
      - custom_entity_link
      - entity_link
      - mixture_link
      - molecule_link
      - dropdown
      - part_link
      - translation_link
      - aa_part_link
      - base_molecule_link
      - blob_link
      - text
      - long_text
      - batch_link
      - storage_link
      - entry_link
      - assay_request_link
      - assay_result_link
      - assay_run_link
      - boolean
      - float
      - integer
      - datetime
      - date
      - json
      type: string
    MixtureWithEntityType:
      allOf:
      - $ref: '#/components/schemas/Mixture'
      - properties:
          entityType:
            enum:
            - mixture
            type: string
        type: object
      type: object
    NucleotideAlignmentSummary:
      properties:
        apiURL:
          description: The canonical url of the Alignment in the API.
          example: https://benchling.com/api/v2/alignments/seqanl_6ZVdX98t
          format: uri
          type: string
        createdAt:
          description: DateTime the Alignment was created
          format: date-time
          type: string
        id:
          example: seqanl_6ZVdX98t
          type: string
        modifiedAt:
          description: DateTime the Alignment was last modified
          format: date-time
          type: string
        name:
          type: string
        referenceSequenceId:
          description: The ID of the template or consensus Sequence associated with the Alignment
          example: seq_MYmsnS1u
          type: string
        webURL:
          description: The Benchling web UI url to view the Alignment
          format: uri
          type: string
      type: object
    ContainerLabels:
      properties:
        barcode:
          example: VIAL001
          type: string
        id:
          example: cnt_12345
          type: string
        name:
          example: My Container
          type: string
      type: object
    AutofillPartsAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response: {}
        type: object
      type: object
    AaSequenceSummary:
      properties:
        entityType:
          enum:
          - aa_sequence
          type: string
        id:
          example: prtn_ObbdtGhC
          type: string
        type:
          deprecated: true
          type: string
      type: object
    DnaSequenceTranscription:
      properties:
        end:
          description: 0-based exclusive end index. The end of the sequence is always represented as 0.
          type: integer
        sequenceId:
          description: Linked RNA sequence ID.
          example: seq_VfVOART1
          type: string
        start:
          description: 0-based inclusive start index.
          type: integer
        strand:
          example: 1
          maximum: 1
          minimum: -1
          type: integer
      type: object
    FeatureBase:
      properties:
        color:
          description: The color of the annotations generated by the feature. Must be a valid hex string
          example: '#F58A5E'
          type: string
        featureLibraryId:
          description: The id of the feature library the feature belongs to
          example: featlib_19kd9aDq
          type: string
        featureType:
          description: 'The type of feature, like gene, promoter, etc. Note: This is an arbitrary string, not an enum

            '
          nullable: true
          type: string
        name:
          description: The name of the feature
          type: string
        pattern:
          description: The pattern used for matching during auto-annotation.
          type: string
      type: object
    BulkUpdateRnaOligosAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response:
            properties:
              rnaOligos:
                items:
                  $ref: '#/components/schemas/RnaOligo'
                type: array
            type: object
        type: object
      type: object
    Batch:
      additionalProperties: false
      properties:
        archiveRecord:
          allOf:
          - $ref: '#/components/schemas/ArchiveRecord'
          nullable: true
        createdAt:
          description: DateTime at which the the result was created
          format: date-time
          readOnly: true
          type: string
        creator:
          allOf:
          - $ref: '#/components/schemas/UserSummary'
          readOnly: true
        defaultConcentration:
          $ref: '#/components/schemas/Measurement'
        entity:
          discriminator:
            mapping:
              aa_sequence: '#/components/schemas/AaSequenceSummary'
              custom_entity: '#/components/schemas/CustomEntitySummary'
              dna_sequence: '#/components/schemas/DnaSequenceSummary'
            propertyName: entityType
          oneOf:
          - $ref: '#/components/schemas/DnaSequenceSummary'
          - $ref: '#/components/schemas/AaSequenceSummary'
          - $ref: '#/components/schemas/CustomEntitySummary'
        fields:
          $ref: '#/components/schemas/Fields'
        id:
          example: bat_UOIr8IjL
          readOnly: true
          type: string
        modifiedAt:
          format: date-time
          readOnly: true
          type: string
        name:
          type: string
        schema:
          allOf:
          - $ref: '#/components/schemas/SchemaSummary'
          nullable: true
          readOnly: true
          title: SchemaProperty
        webURL:
          readOnly: true
          type: string
      type: object
    RnaSequenceWithEntityType:
      allOf:
      - $ref: '#/components/schemas/RnaSequence'
      - properties:
          entityType:
            enum:
            - rna_sequence
            type: string
        type: object
      type: object
    BulkCreateRnaSequencesAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response:
            properties:
              rnaSequences:
                items:
                  $ref: '#/components/schemas/RnaSequence'
                type: array
            type: object
        type: object
      type: object
    NotFoundError:
      properties:
        error:
          allOf:
          - $ref: '#/components/schemas/BaseError'
          - properties:
              invalidId:
                type: string
              type:
                enum:
                - invalid_request_error
                type: string
      type: object
    AutofillTranscriptionsAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response: {}
        type: object
      type: object
    MixtureMeasurementUnits:
      enum:
      - nL
      - uL
      - mL
      - L
      - g
      - kg
      - mg
      - ug
      - Units
      example: L
      nullable: true
      type: string
    Container:
      properties:
        archiveRecord:
          allOf:
          - $ref: '#/components/schemas/ArchiveRecord'
          nullable: true
          readOnly: true
        barcode:
          nullable: true
          type: string
        checkoutRecord:
          allOf:
          - $ref: '#/components/schemas/CheckoutRecord'
          readOnly: true
        contents:
          items:
            $ref: '#/components/schemas/ContainerContent'
          readOnly: true
          type: array
        createdAt:
          format: date-time
          readOnly: true
          type: string
        creator:
          allOf:
          - $ref: '#/components/schemas/UserSummary'
          readOnly: true
        fields:
          $ref: '#/components/schemas/Fields'
        id:
          example: con_ZBL9QQWD
          readOnly: true
          type: string
        modifiedAt:
          format: date-time
          readOnly: true
          type: string
        name:
          type: string
        parentStorageId:
          nullable: true
          type: string
        parentStorageSchema:
          allOf:
          - $ref: '#/components/schemas/SchemaSummary'
          nullable: true
          readOnly: true
        projectId:
          nullable: true
          type: string
        quantity:
          $ref: '#/components/schemas/ContainerQuantity'
        restrictedSampleParties:
          items:
            anyOf:
            - $ref: '#/components/schemas/UserSummary'
            - $ref: '#/components/schemas/TeamSummary'
          type: array
        restrictionStatus:
          allOf:
          - $ref: '#/components/schemas/SampleRestrictionStatus'
        role:
          allOf:
          - $ref: '#/components/schemas/ExperimentalWellRole'
          nullable: true
        sampleOwners:
          items:
            anyOf:
            - $ref: '#/components/schemas/UserSummary'
            - $ref: '#/components/schemas/TeamSummary'
          type: array
        schema:
          allOf:
          - $ref: '#/components/schemas/SchemaSummary'
          nullable: true
          readOnly: true
        volume:
          $ref: '#/components/schemas/DeprecatedContainerVolumeForResponse'
        webURL:
          readOnly: true
          type: string
      type: object
    BulkUpdateCustomEntitiesAsyncTask:
      allOf:
      - $ref: '#/components/schemas/AsyncTask'
      - additionalProperties: false
        properties:
          response:
            properties:
              customEntities:
                items:
                  $ref: '#/components/schemas/CustomEntity'
                type: array
            type: object
        type: object
      type: object
    AaSequence:
      properties:
        aliases:
          description: Array of aliases
          items:
            type: string
          type: array
        aminoAcids:
          description: Amino acids of the AA sequence.
          example: IKTATARRELAETSWTGDRLWGFSDNWAPALRRPSPSALGK
          type: string
        annotations:
          description: Array of annotation objects on the AA sequence.
          items:
            $ref: '#/components/schemas/AaAnnotation'
          type: array
        apiURL:
          description: The canonical url of the AA Sequence in the API.
          example: https://benchling.com/api/v2/aa-sequences/prtn_7nMBOMm0
          format: uri
          readOnly: true
          type: string
        archiveRecord:
          allOf:
          - $ref: '#/components/schemas/ArchiveRecord'
          nullable: true
        authors:
          items:
            $ref: '#/components/schemas/UserSummary'
          type: array
        createdAt:
          description: DateTime the AA sequence was created.
          format: date-time
          readOnly: true
          type: string
        creator:
          $ref: '#/components/schemas/UserSummary'
        customFields:
          allOf:
          - $ref: '#/components/schemas/CustomFields'
          description: Custom fields set on the AA sequence.
        entityRegistryId:
          description: Registry ID of the AA sequence if registered.
          nullable: true
          type: string
        fields:
          $ref: '#/components/schemas/Fields'
        folderId:
          description: ID of the folder that contains the AA sequence.
          nullable: true
          type: string
        id:
          description: ID of the AA sequence.
          example: prtn_ObbdtGhC
          type: string
        length:
          description: Number of amino acids in the AA sequence.
          type: integer
        modifiedAt:
          description: DateTime the AA sequence was last modified.
          format: date-time
          readOnly: true
          type: string
        name:
          description: Name of the AA sequence.
          type: string
        registrationOrigin:
          allOf:
          - $ref: '#/components/schemas/RegistrationOrigin'
          nullable: true
          readOnly: true
        registryId:
          description: Registry the AA sequence is registered in.
          nullable: true
          type: string
        schema:
          allOf:
          - $ref: '#/components/schemas/SchemaSummary'
          nullable: true
        url:
          description: The path of the web URL, omitting the tenant domain
          type: string
        webURL:
          description: URL of the AA sequence.
          example: https://benchling.com/benchling/f/lib_55UxcIps-registry/prtn_7nMBOMm0-kedchain11/edit"
          format: uri
          readOnly: true
          type: string
      type: object
    CustomEntity:
      properties:
        aliases:
          items:
            example: sBN000
            type: string
          type: array
        apiURL:
          description: The canonical url of the Custom Entity in the API.
          example: https://benchling.com/api/v2/custom-entities/bfi_xCUXNVyG
          format: uri
          readOnly: true
          type: string
        archiveRecord:
          allOf:
          - $ref: '#/components/schemas/ArchiveRecord'
          nullable: true
        authors:
          items:
            $ref: '#/components/schemas/UserSummary'
          type: array
        createdAt:
          example: '2017-04-18T05:54:56.247545+00:00'
          format: date-time
          readOnly: true
          type: string
        creator:
          allOf:
          - $ref: '#/components/schemas/UserSummary'
          - readOnly: true
        customFields:
          $ref: '#/components/schemas/CustomFields'
        entityRegistryId:
          example: sBN000
          nullable: true
          type: string
        fields:
          $ref: '#/components/schemas/Fields'
        folderId:
          example: lib_R8KcsjhW
          nullable: true
          type: string
        id:
          example: bfi_xCUXNVyG
          type: string
        modifiedAt:
          example: '2017-04-18T05:55:48.685345+00:00'
          format: date-time
          readOnly: true
          type: string
        name:
          example: sBN000
          type: string
        registrationOrigin:
          allOf:
          - $ref: '#/components/schemas/RegistrationOrigin'
          nullable: true
          readOnly: true
        registryId:
          example: src_NetYd96a
          nullable: true
          type: string
        schema:
          allOf:
          - $ref: '#/components/schemas/SchemaSummary'
          example:
            id: ts_EM122lfJ
            name: Strain
          nullable: true
        url:
          description: The path of the web URL, omitting the tenant domain
          type: string
        webURL:
          example: https://benchling.com/benchling/f/R8KcsjhW-academic-registry/bfi-xCUXNVyG-sbn000/edit
          readOnly: true
          type: string
      type: object
    RnaOligoWithEntityType:
      allOf:
      - $ref: '#/components/schemas/RnaOligo'
      - properties:
          entityType:
            enum:
            - rna_oligo
            type: string
        type: object
      type: object
    TeamSummary:
      allOf:
      - type: object
      - properties:
          id:
            type: string
          name:
            type: string
      - example:
          id: team_5cjIguqc
          name: Elion's Team
    AaSequenceWithEntityType:
      allOf:
      - $ref: '#/components/schemas/AaSequence'
      - properties:
          entityType:
            enum:
            - aa_sequence
            type: string
        type: object
      type: object
    Blob:
      properties:
        id:
          description: The universally unique identifier (UUID) for the blob.
          example: c33fe52d-fe6a-4c98-adcd-211bdf6778f7
          format: uuid
          type: string
        mimeType:
          description: eg. application/jpeg
          example: text/csv
          maxLength: 100
          type: string
        name:
          description: Name of the blob
          example: MyInstrumentInputFile.csv
          maxLength: 1000
          type: string
        type:
          description: 'One of RAW_FILE or VISUALIZATION. If VISUALIZATION, the blob may be displayed as an image preview.

            '
          enum:
          - RAW_FILE
          - VISUALIZATION
          type: string
        uploadStatus:
          enum:
          - IN_PROGRESS
          - COMPLETE
          - ABORTED
          type: string
      type: object
    RnaSequencePart:
      allOf:
      - $ref: '#/components/schemas/NucleotideSequencePart'
      - properties:
          strand:
            example: 1
            maximum: 1
            minimum: 1
            type: integer
        type: object
    CustomEntityWithEntityType:
      allOf:
      - $ref: '#/components/schemas/CustomEntity'
      - properties:
          entityType:
            enum:
            - custom_entity
            type: string
        type: object
      type: object
    CustomField:
      properties:
        value:
          type: string
      type: object
    AutomationOutputProcessor:
      allOf:
      - $ref: '#/components/schemas/AutomationFile'
      - properties:
          apiURL:
            description: The canonical url of the Automation Output Processor in the API.
            example: https://benchling.com/api/v2/automation-output-processors/aop_C3wGA9HF
            format: uri
            readOnly: true
            type: string
          archiveRecord:
            allOf:
            - $ref: '#/components/schemas/ArchiveRecord'
            nullable: true
          completeWithErrors:
            description: Specifies whether file processing should complete with errors. False means any error in output file processing will result in no actions being committed. True means that if row-level errors occur, then failing rows and their errors will be saved to errorFile, and actions from successful rows will be committed.
            type: boolean
          createdAt:
            description: DateTime the Automation Output Processor was created
            format: date-time
            type: string
          errorFile:
            allOf:
            - $ref: '#/components/schemas/Blob'
            nullable: true
          id:
            example: aop_C3wGA9HF
            type: string
          modifiedAt:
            description: DateTime the Automation Output Processor was last modified
            format: date-time
            type: string
          progressStats:
            $ref: '#/components/schemas/AutomationProgressStats'
          transforms:
            items:
              allOf:
              - $ref: '#/components/schemas/LabAutomationTransform'
              nullable: true
            type: array
        type: object
    EntityOrInaccessibleResource:
      oneOf:
      - $ref: '#/components/schemas/Entity'
      - $ref: '#/components/schemas/InaccessibleResource'
      type: object
    SequenceFeatureCustomField:
      description: A name and value pair associated with a sequence feature (annotation or translation). For genbank imports, these are the qualifiers associated with each feature.
      properties:
        name:
          description: Name of the custom field
          type: string
        value:
          description: Value of the custom field
          type: string
      type: object
    Entity:
      discriminator:
        mapping:
          aa_sequence: '#/components/schemas/AaSequenceWithEntityType'
          custom_entity: '#/components/schemas/CustomEntityWithEntityType'
          dna_oligo: '#/components/schemas/DnaOligoWithEntityType'
          dna_sequence: '#/components/schemas/DnaSequenceWithEntityType'
          mixture: '#/components/schemas/MixtureWithEntityType'
          molecule: '#/components/schemas/MoleculeWithEntityType'
          rna_oligo: '#/components/schemas/RnaOligoWithEntityType'
          rna_sequence: '#/components/schemas/RnaSequenceWithEntityType'
        propertyName: entityType
      oneOf:
      - $ref: '#/components/schemas/DnaSequenceWithEntityType'
      - $ref: '#/components/schemas/RnaSequenceWithEntityType'
      - $ref: '#/components/schemas/AaSequenceWithEntityType'
      - $ref: '#/components/schemas/MixtureWithEntityType'
      - $ref: '#/components/schemas/DnaOligoWithEntityType'
      - $ref: '#/components/schemas/RnaOligoWithEntityType'
      - $ref: '#/components/schemas/MoleculeWithEntityType'
      - $ref: '#/components/schemas/CustomEntityWithEntityType'
      type: object
    AaAnnotation:
      properties:
        color:
          type: string
        end:
          description: 0-based exclusive end index. The end of the AA sequence is always represented as 0.
          type: integer
        id:
          example: prtnann_o7zMPG0P
          type: string
        name:
          maxLength: 255
          type: string
        notes:
          example: Cong et al Science. 2013 Jan 3.
          maxLength: 10000
          type: string
        start:
          description: 0-based inclusive start index.
          type: integer
        type:
          example: Site
          maxLength: 255
          type: string
      type: object
    SampleRestrictionStatus:
      enum:
      - RESTRICTED
      - UNRESTRICTED
      - NOT_APPLICABLE
      type: string
    SequenceFeatureBase:
      properties:
        color:
          description: Hex color code used when displaying this feature in the UI.
          example: '#F58A5E'
          type: string
        customFields:
          items:
            $ref: '#/components/schemas/SequenceFeatureCustomField'
          maxItems: 100
          type: array
        name:
          maxLength: 2048
          type: string
        notes:
          example: Cong et al Science. 2013 Jan 3.
          maxLength: 10000
          type: string
      type: object
    IngredientMeasurementUnits:
      enum:
      - nL
      - uL
      - mL
      - L
      - mg
      - g
      - kg
      - ug
      - Units
      - Cells
      - mol
      - mmol
      - umol
      example: mL
      nullable: true
      type: string
    AOPProcessOutputAsyncTask:
      allOf:
      

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# Full source: https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/openapi/benchling-tasks-api-openapi.yml