Benchling Rna Sequence API

openapi: 3.2.0
info:
  license:
    name: Apache 2.0
    url: http://www.apache.org/licenses/LICENSE-2.0.html
  title: Benchling Rna Sequence API
  version: 2.0.0
  description: 'Represents an RNA sequence in Benchling''s molecular biology platform. An RnaSequence stores

    the nucleotide bases (using A, C, G, U) along with annotations marking functional regions,

    translation annotations for protein-coding regions (see Translation), primer binding sites

    (see Primer), and part features linking to other registered sequences (see RnaPart). RNA

    sequences are used for modeling messenger RNAs, non-coding RNAs, CRISPR guide RNAs, and

    other RNA molecules. Sequences can be registered in the Registry with a unique

    entityRegistryId, organized in folders, and linked via schema fields to other entities.

    For modified therapeutic RNAs, see modifiedNucleotides which captures chemical modifications.

    Also known as ''Sequence'' in the Benchling interface, with IDs prefixed by ''seq''.'
servers:
- url: /api/v3
security:
- oAuth: []
- basicApiKeyAuth: []
tags:
- description: 'Represents an RNA sequence in Benchling''s molecular biology platform. An RnaSequence stores

    the nucleotide bases (using A, C, G, U) along with annotations marking functional regions,

    translation annotations for protein-coding regions (see Translation), primer binding sites

    (see Primer), and part features linking to other registered sequences (see RnaPart). RNA

    sequences are used for modeling messenger RNAs, non-coding RNAs, CRISPR guide RNAs, and

    other RNA molecules. Sequences can be registered in the Registry with a unique

    entityRegistryId, organized in folders, and linked via schema fields to other entities.

    For modified therapeutic RNAs, see modifiedNucleotides which captures chemical modifications.

    Also known as ''Sequence'' in the Benchling interface, with IDs prefixed by ''seq''.'
  name: RnaSequence
  x-bnch-core-type: RnaSequence
  x-bnch-organization: Benchling
paths:
  /rna-sequence:
    post:
      description: Create RnaSequence.
      operationId: RnaSequence.Create
      parameters:
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      requestBody:
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/CreateRnaSequenceInput'
      responses:
        '201':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RnaSequence'
          description: Created
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Create RnaSequence
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 4
  /rna-sequence/items:
    get:
      description: List RnaSequence items.
      operationId: RnaSequence.List
      parameters:
      - $ref: '#/components/parameters/archiveReason.anyOf'
      - $ref: '#/components/parameters/archived.anyOf'
      - $ref: '#/components/parameters/authors.anyOf'
      - $ref: '#/components/parameters/bases.anyOf'
      - $ref: '#/components/parameters/createdAt.gt'
      - $ref: '#/components/parameters/createdAt.gte'
      - $ref: '#/components/parameters/createdAt.lt'
      - $ref: '#/components/parameters/createdAt.lte'
      - $ref: '#/components/parameters/creator.anyOf'
      - $ref: '#/components/parameters/fieldset.anyOf'
      - $ref: '#/components/parameters/id.anyOf'
      - $ref: '#/components/parameters/mentionedIn.anyOf'
      - $ref: '#/components/parameters/modifiedAt.gt'
      - $ref: '#/components/parameters/modifiedAt.gte'
      - $ref: '#/components/parameters/modifiedAt.lt'
      - $ref: '#/components/parameters/modifiedAt.lte'
      - $ref: '#/components/parameters/name.anyOf'
      - $ref: '#/components/parameters/name.anyOf.caseSensitive'
      - $ref: '#/components/parameters/nextToken'
      - $ref: '#/components/parameters/omit'
      - $ref: '#/components/parameters/pageSize'
      - $ref: '#/components/parameters/project.eq'
      - $ref: '#/components/parameters/registry.eq'
      - $ref: '#/components/parameters/returning'
      - $ref: '#/components/parameters/schema.anyOf'
      - $ref: '#/components/parameters/schema.eq'
      - $ref: '#/components/parameters/systemCategory.anyOf'
      - description: 'Method by which to order results. Valid sorts are: createdAt (created time, oldest first) and modifiedAt (modified time, oldest first). Use :asc or :desc to specify ascending or descending order. Default is modifiedAt:desc.'
        in: query
        name: sort
        schema:
          default: modifiedAt:desc
          enum:
          - createdAt:asc
          - createdAt:desc
          - modifiedAt:asc
          - modifiedAt:desc
          type: string
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      responses:
        '200':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RnaSequencePaginatedList'
          description: OK
          headers: {}
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: List RnaSequence items
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 4
  /rna-sequence/{rna_sequence_id}:
    get:
      description: Get a single RnaSequence by ID.
      operationId: RnaSequence.Get
      parameters:
      - description: ID of the RnaSequence.
        in: path
        name: rna_sequence_id
        required: true
        schema:
          type: string
      - $ref: '#/components/parameters/returning'
      - $ref: '#/components/parameters/omit'
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      responses:
        '200':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RnaSequence'
          description: OK
          headers: {}
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Get RnaSequence by ID
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 5
    patch:
      description: Update RnaSequence.
      operationId: RnaSequence.Update
      parameters:
      - description: ID of the RnaSequence.
        in: path
        name: rna_sequence_id
        required: true
        schema:
          type: string
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      requestBody:
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/UpdateRnaSequenceInput'
      responses:
        '200':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RnaSequence'
          description: OK
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Update RnaSequence
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 4
  /rna-sequence/{rna_sequence_id}/authors/items:
    get:
      description: List Principal items.
      operationId: RnaSequence.authors.List
      parameters:
      - description: ID of the RnaSequence.
        in: path
        name: rna_sequence_id
        required: true
        schema:
          type: string
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      responses:
        '200':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/PrincipalUnpaginatedList'
          description: OK
          headers: {}
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: List Principal items
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 4
  /rna-sequence/{rna_sequence_id}/modified-nucleotides/items:
    get:
      description: List ModifiedNucleotide items.
      operationId: RnaSequence.modifiedNucleotides.List
      parameters:
      - $ref: '#/components/parameters/nextToken'
      - $ref: '#/components/parameters/pageSize'
      - description: ID of the RnaSequence.
        in: path
        name: rna_sequence_id
        required: true
        schema:
          type: string
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      responses:
        '200':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ModifiedNucleotidePaginatedList'
          description: OK
          headers: {}
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: List ModifiedNucleotide items
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 4
  /rna-sequence/{rna_sequence_id}/parts/items:
    get:
      description: List RnaPart items.
      operationId: RnaSequence.parts.List
      parameters:
      - description: ID of the RnaSequence.
        in: path
        name: rna_sequence_id
        required: true
        schema:
          type: string
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      responses:
        '200':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RnaPartUnpaginatedList'
          description: OK
          headers: {}
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: List RnaPart items
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 4
  /rna-sequence:batch-create:
    post:
      description: Batch create RnaSequence synchronously in one transaction. Maximum 25 items per request.
      operationId: RnaSequence.BatchCreate
      parameters:
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      requestBody:
        content:
          application/json:
            schema:
              additionalProperties: false
              properties:
                items:
                  items:
                    $ref: '#/components/schemas/CreateRnaSequenceInput'
                  maxItems: 25
                  minItems: 1
                  type: array
              required:
              - items
              type: object
      responses:
        '201':
          content:
            application/json:
              schema:
                additionalProperties: false
                properties:
                  items:
                    items:
                      $ref: '#/components/schemas/RnaSequence'
                    type: array
                required:
                - items
                type: object
          description: Created
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Batch create RnaSequence
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 3
  /rna-sequence:batch-update:
    patch:
      description: Batch update RnaSequence synchronously in one transaction. Maximum 25 items per request.
      operationId: RnaSequence.BatchUpdate
      parameters:
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      requestBody:
        content:
          application/json:
            schema:
              additionalProperties: false
              properties:
                items:
                  items:
                    $ref: '#/components/schemas/UpdateRnaSequenceInputWithPathParams'
                  maxItems: 25
                  minItems: 1
                  type: array
              required:
              - items
              type: object
      responses:
        '200':
          content:
            application/json:
              schema:
                additionalProperties: false
                properties:
                  items:
                    items:
                      $ref: '#/components/schemas/RnaSequence'
                    type: array
                required:
                - items
                type: object
          description: OK
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Batch update RnaSequence
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 3
  /rna-sequence:bulk-create:
    post:
      description: Bulk create RnaSequence.
      operationId: RnaSequence.BulkCreate
      parameters:
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      requestBody:
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/BulkImport'
      responses:
        '202':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AsyncTaskLink'
          description: Task started
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Bulk create RnaSequence
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 2
  /rna-sequence:bulk-update:
    patch:
      description: Bulk update RnaSequence.
      operationId: RnaSequence.BulkUpdate
      parameters:
      - description: Set to true to access beta operations via /api/v3.
        in: header
        name: EARLY-ACCESS
        required: false
        schema:
          type: string
      requestBody:
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/BulkImport'
      responses:
        '202':
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AsyncTaskLink'
          description: Task started
        '400':
          $ref: '#/components/responses/BadRequest'
        '403':
          $ref: '#/components/responses/Forbidden'
        '404':
          $ref: '#/components/responses/NotFound'
        '429':
          $ref: '#/components/responses/TooManyRequests'
        '500':
          $ref: '#/components/responses/InternalServerError'
      summary: Bulk update RnaSequence
      tags:
      - RnaSequence
      x-bnch-rate-limit-tier: 2
webhooks:
  v3.rnaSequence.created:
    post:
      description: Sent to Benchling Apps subscribed to `v3.rnaSequence.created` when a RnaSequence they can access is created.
      operationId: RnaSequence.Created
      requestBody:
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/RnaSequenceCreatedWebhookEnvelopeV3'
        description: The `v3.rnaSequence.created` event.
        required: true
      responses:
        '200':
          description: Return a 200 status code to acknowledge receipt of the webhook.
      summary: RnaSequence created
      tags:
      - RnaSequence
  v3.rnaSequence.updated:
    post:
      description: Sent to Benchling Apps subscribed to `v3.rnaSequence.updated` when a RnaSequence they can access is updated. `message.properties` lists the properties that changed.
      operationId: RnaSequence.Updated
      requestBody:
        content:
          application/json:
            schema:
              $ref: '#/components/schemas/RnaSequenceUpdatedWebhookEnvelopeV3'
        description: The `v3.rnaSequence.updated` event.
        required: true
      responses:
        '200':
          description: Return a 200 status code to acknowledge receipt of the webhook.
      summary: RnaSequence updated
      tags:
      - RnaSequence
components:
  schemas:
    WebhookApp:
      description: The Benchling App the webhook was delivered to.
      properties:
        id:
          description: API ID of the app.
          examples:
          - app_1jdbvuo2740aslk
          type: string
      required:
      - id
      type: object
    ProjectRef:
      properties:
        __typename:
          type: string
        id:
          format: api_id
          type: string
      type: object
    AppInstallation:
      description: 'Represents an installed Benchling App on a tenant, created from an `AppDefinitionVersion`.

        App installations store tenant-specific configuration values and feature bindings. As a

        Principal, app installations can be attributed as actors for API operations and auditing.'
      properties:
        __typename:
          type: string
        archiveReason:
          type:
          - 'null'
          - string
        archived:
          type: boolean
        configurationValues:
          format: uri
          type: string
        createdAt:
          format: datetime
          type:
          - 'null'
          - string
        creator:
          oneOf:
          - $ref: '#/components/schemas/PrincipalRef'
          - type: 'null'
        featureValues:
          items:
            $ref: '#/components/schemas/AssayRunFeatureValue'
          type: array
        id:
          type: string
        modifiedAt:
          format: datetime
          type:
          - 'null'
          - string
        name:
          type: string
      type: object
    Primer:
      description: 'Represents a primer binding site on a nucleotide sequence, indicating where an oligonucleotide primer anneals

        for PCR amplification or sequencing. The Primer links to an Oligo entity containing the actual primer sequence

        and name. Position fields define the binding region on the template (start/end), while bindPosition specifies

        the 3'' end of the binding region (critical for extension). The overhangLength indicates how many 5'' bases

        extend beyond the binding region (used for adding restriction sites or tags). Strand indicates whether the

        primer binds to the forward (1) or reverse (-1) strand.'
      properties:
        __typename:
          type: string
        bindPosition:
          description: 0-based index of the base at the 3' end of the binding region.
          type: integer
        end:
          description: '0-based exclusive end of the binding region. For ranges ending at the end of a circular sequence,

            this value is always the length of the sequence, never 0.'
          type: integer
        oligo:
          $ref: '#/components/schemas/OligoRef'
          description: Linked primer entity, which holds the name, bases, and color for this primer bind site.
        overhangLength:
          description: Number of 5' primer bases that are not part of the binding region.
          type: integer
        start:
          description: 0-based inclusive start of the binding region.
          type: integer
        strand:
          description: Strand for this primer; 1 for forward strand, -1 for reverse strand.
          type: integer
      type: object
    CustomField:
      description: 'A name-value pair for storing additional metadata on objects that support custom fields.

        CustomFields provide a flexible way to attach arbitrary string data to entities, containers,

        datasets, and other Benchling objects without modifying their schemas. Objects that can

        have custom fields implement the HasCustomFields interface. Unlike schema-defined fields,

        custom fields are not validated against a schema and can be freely added or modified.'
      properties:
        __typename:
          type: string
        name:
          type:
          - 'null'
          - string
        value:
          type:
          - 'null'
          - string
      type: object
    RnaPartInput:
      additionalProperties: false
      properties:
        end:
          type: integer
        sequenceId:
          type: string
        start:
          type: integer
      required:
      - end
      - sequenceId
      - start
      type: object
    User:
      description: 'Represents a human user in Benchling who can log in, perform actions, and own data.

        Users belong to one or more Organizations and may be members of Teams within those

        organizations. As an Owner, users can own Projects, Folders, and other resources.

        As a Principal, users can be assigned as reviewers, authors, or collaborators on

        various items. Users have attributes like email and username for identification.

        Users are distinct from `ServicePrincipal`, which represents non-human service

        accounts used for integrations.'
      properties:
        __typename:
          type: string
        createdAt:
          format: datetime
          type: string
        email:
          type: string
        id:
          type: string
        lastSeen:
          format: datetime
          type:
          - 'null'
          - string
        modifiedAt:
          format: datetime
          type: string
        name:
          type:
          - 'null'
          - string
        status:
          enum:
          - ACTIVE
          - SUSPENDED
          type: string
        username:
          type: string
      type: object
    CustomFieldInput:
      additionalProperties: false
      properties:
        name:
          type: string
        value:
          type: string
      required:
      - name
      type: object
    SchemaFieldValue:
      description: 'Represents a field value on a schematized object, pairing a `fieldDefinition` (describing the

        field''s type and constraints) with its actual `value` (a `BenchlingValue` such as text, number,

        date, or link to another object). The value may be null if no value has been set. Used within

        the `schemaFields` collection on objects that implement `HasSchema` to provide access to all

        custom field values defined by the object''s schema.'
      properties:
        __typename:
          type: string
        fieldDefinition:
          $ref: '#/components/schemas/SchemaFieldDefinitionRef'
        id:
          type: string
        linkedEntityId:
          type:
          - 'null'
          - string
        value:
          description: Union of BooleanValue, DateTimeValue, DateValue, DecimalValue, IntegerValue, JsonValue, ObjectLinkValue, ObjectLinkListValue, TextAndUrlValue, TextValue, ArrayValue
          oneOf:
          - anyOf:
            - $ref: '#/components/schemas/BooleanValue'
            - $ref: '#/components/schemas/DateTimeValue'
            - $ref: '#/components/schemas/DateValue'
            - $ref: '#/components/schemas/DecimalValue'
            - $ref: '#/components/schemas/IntegerValue'
            - $ref: '#/components/schemas/JsonValue'
            - $ref: '#/components/schemas/ObjectLinkValue'
            - $ref: '#/components/schemas/ObjectLinkListValue'
            - $ref: '#/components/schemas/TextAndUrlValue'
            - $ref: '#/components/schemas/TextValue'
            - $ref: '#/components/schemas/ArrayValue'
            discriminator:
              propertyName: __typename
          - type: 'null'
      type: object
    AppConfigWorkflowTaskSchemaOutput:
      description: Defines the output field structure for a workflow task schema configuration.
      properties:
        __typename:
          type: string
        fieldDefinitions:
          oneOf:
          - items:
              $ref: '#/components/schemas/AppConfigFieldDefinition'
            type: array
          - type: 'null'
      type: object
    ResourceAppConfigSpec:
      description: 'Specifies that an app configuration field should reference a Benchling object instance.

        The type field identifies the kind of object required, matching the BenchlingAppType

        values used in app manifests (e.g. dna_sequence, folder, registry). Covers all instance

        reference types with no additional spec constraints beyond requiredConfig. For schema

        references use SchemaAppConfigSpec or EntitySchemaAppConfigSpec.'
      properties:
        __typename:
          type: string
        requiredConfig:
          type:
          - 'null'
          - boolean
        type:
          enum:
          - BOX_SCHEMA
          - CONTAINER_SCHEMA
          - ENTRY_SCHEMA
          - LEGACY_REQUEST_SCHEMA
          - LOCATION_SCHEMA
          - PLATE_SCHEMA
          - RESULT_SCHEMA
          - RUN_SCHEMA
          - WORKFLOW_TASK_SCHEMA
          - AA_SEQUENCE
          - ASSAY_RESULT
          - ASSAY_RUN
          - AUTOMATION_INPUT_GENERATOR
          - AUTOMATION_OUTPUT_PROCESSOR
          - BLOB
          - BOX
          - CONTAINER
          - CUSTOM_ENTITY
          - DNA_ALIGNMENT
          - DNA_OLIGO
          - DNA_SEQUENCE
          - DROPDOWN
          - DROPDOWN_OPTION
          - ENTRY
          - FIELD
          - FOLDER
          - LEGACY_REQUEST
          - LOCATION
          - MIXTURE
          - MOLECULE
          - PLATE
          - PROJECT
          - REGISTRY
          - RNA_OLIGO
          - RNA_SEQUENCE
          - WORKFLOW_TASK_STATUS
          - WORKLIST
          - null
          type:
          - 'null'
          - string
      type: object
    RnaSequenceCreatedWebhookEnvelopeV3:
      allOf:
      - $ref: '#/components/schemas/WebhookEnvelopeBaseV0'
      - properties:
          message:
            $ref: '#/components/schemas/RnaSequenceCreatedWebhookV3'
        required:
        - message
        type: object
      description: Request body Benchling sends for a `v3.rnaSequence.created` event.
    DateTimeValue:
      description: A type that represents datetime values.
      properties:
        __typename:
          type: string
        value:
          description: The datetime value with UTC as the timezone.
          format: datetime
          type: string
      type: object
    RegistrationOrigin:
      description: 'Captures the provenance of an entity''s registration into the registry. The `originEntry` links

        to the `DocumentLike` (typically an entry or notebook) from which the entity was registered,

        providing traceability back to the original experimental context. The `registeredAt` timestamp

        records when the registration occurred. This information helps scientists understand where

        registered entities came from and when they were added to the registry.'
      properties:
        __typename:
          type: string
        originEntry:
          oneOf:
          - $ref: '#/components/schemas/DocumentLikeRef'
          - type: 'null'
        registeredAt:
          format: datetime
          type:
          - 'null'
          - string
      type: object
    Translation:
      description: 'Represents a protein-coding region (CDS) on a nucleotide sequence, showing the translated

        amino acid sequence. Translations can span a single contiguous region or multiple regions

        for spliced genes (see RegionsListItem). The aminoAcids field contains the computed protein

        sequence based on the geneticCode (see CodonTranslationTable). The translateFirstCodonToMethionine

        option forces the start codon to encode methionine regardless of the actual codon. Translations

        display as colored overlays on the sequence viewer, with the three-letter amino acid codes

        shown above the nucleotide bases.'
      properties:
        __typename:
          type: string
        aminoAcids:
          description: 'Calculated amino acid translation of the specified regions, combining codons across regions if

            necessary.'
          type: string
        color:
          description: Hex color when displaying the translation.
          type: string
        customFields:
          description: Custom fields on the translation.
          items:
            $ref: '#/components/schemas/CustomField'
          type: array
        end:
          deprecated: true
          description: '0-based exclusive end index. For ranges ending at the end of a circular sequence, this value is

            always the length of the sequence, never 0. Use regions instead for location information.'
          type:
          - 'null'
          - integer
        geneticCode:
          description: Genetic code for the translation.
          enum:
          - STANDARD
          - VERTEBRATE_MITOCHONDRIAL
          - YEAST_MITOCHONDRIAL
          - MOLD_PROTOZOAN_COELENTERATE_MITOCHONDRIAL_MYCOPLASMA_SPIROPLASMA
          - INVERTEBRATE_MITOCHONDRIAL
          - CILIATE_DASYCLADACEAN_HEXAMITA_NUCLEAR
          - ECHINODERM_FLATWORM_MITOCHONDRIAL
          - EUPLOTID_NUCLEAR
          - BACTERIAL_ARCHAEAL_PLANT_PLASTID
          - ALTERNATIVE_YEAST_NUCLEAR
          - ASCIDIAN_MITOCHONDRIAL
          - ALTERNATIVE_FLATWORM_MITOCHONDRIAL
          - CHLOROPHYCEAN_MITOCHONDRIAL
          - TREMATODE_MITOCHONDRIAL
          - SCENEDESMUS_OBLIQUUS_MITOCHONDRIAL
          - THRAUSTOCHYTRIUM_MITOCHONDRIAL
          - RHABDOPLEURIDAE_MITOCHONDRIAL
          - CANDIDATE_DIVISION_SR1_GRACILIBACTERIA
          - PACHYSOLEN_TANNOPHILUS_NUCLEAR
          - KARYORELICT_NUCLEAR
          - CONDYLOSTOMA_NUCLEAR
          - MESODINIUM_NUCLEAR
          - PERITRICH_NUCLEAR
          - BLASTOCRITHIDIA_NUCLEAR
          - CEPHALODISCIDAE_MITOCHONDRIAL_UAA_TYR
          type: string
        name:
          description: Name of the translation.
          type: string
        notes:

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# Full source: https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/openapi/benchling-rnasequence-api-openapi.yml