Benchling

Benchling Oligo Duplex API

An oligo duplex is a therapeutic modality consisting of two complementary oligonucleotide strands (forward and reverse) with optional conjugate molecules attached to either strand. The classic example is siRNA (small interfering RNA), which uses double-stranded RNA for gene silencing. The forwardStrand and reverseStrand reference the underlying oligo entities, with hydrogen bonds automatically computed for base pairing. Structure is defined using HELM notation and can be edited via the visual structure editor. Supports versioning (see OligoDuplexVersion) to track changes over time.

GitHub OpenAPI

Operations 9

POST /oligo-duplex Create OligoDuplex #
GET /oligo-duplex/items List OligoDuplex items #
GET /oligo-duplex/{oligo_duplex_id} Get OligoDuplex by ID #
PATCH /oligo-duplex/{oligo_duplex_id} Update OligoDuplex #
GET /oligo-duplex/{oligo_duplex_id}/authors/items List Principal items #
POST /oligo-duplex:batch-create Batch create OligoDuplex #
PATCH /oligo-duplex:batch-update Batch update OligoDuplex #
POST /oligo-duplex:bulk-create Bulk create OligoDuplex #
PATCH /oligo-duplex:bulk-update Bulk update OligoDuplex #

Documentation

📖
Documentation
https://docs.benchling.com/docs/developer-platform-overview
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APIReference
https://benchling.com/api/v3/reference
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Authentication
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/authentication/benchling-authentication.yml
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RateLimits
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/rate-limits/benchling-rate-limits.yml

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/openapi/benchling-oligoduplex-api-openapi.yml

Other Resources

🔗
OpenAPIRemote
https://benchling.com/api/v3/openapi.yaml
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OAuthScopes
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/scopes/benchling-scopes.yml
🔗
Conventions
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/conventions/benchling-conventions.yml
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ErrorCatalog
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/errors/benchling-problem-types.yml
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DataModel
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/data-model/benchling-data-model.yml
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Webhooks
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/asyncapi/benchling-webhooks.yml
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Lifecycle
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/lifecycle/benchling-lifecycle.yml
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ChangeLog
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/changelog/benchling-changelog.yml
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StabilityPolicy
https://docs.benchling.com/docs/stability-guidelines
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SDKs
https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/packages/benchling-packages.yml

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OpenAPI Specification

benchling-oligoduplex-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  license:
    name: Apache 2.0
    url: http://www.apache.org/licenses/LICENSE-2.0.html
  title: Benchling Oligo Duplex API
  version: 2.0.0
  description: 'An oligo duplex is a therapeutic modality consisting of two complementary

    oligonucleotide strands (forward and reverse) with optional conjugate molecules

    attached to either strand.'
servers:
- url: /api/v3
security:
- oAuth: []
- basicApiKeyAuth: []
tags:


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# Full source: https://raw.githubusercontent.com/api-evangelist/benchling/refs/heads/main/openapi/benchling-oligoduplex-api-openapi.yml