Benchling

Benchling File API

A File represents an uploaded document or data file that is surfaced in Benchling's Data Catalog for discovery and organization. Files are primarily created through Benchling Connect (for external file integrations) and the Analysis Tool (for pipeline outputs). Each File is backed by a ScratchFile containing the actual binary content and upload state. Files are folder-based items that can be starred for quick access, linked to Studies, and support custom fields. Files differ from EntryExternalFile (attachments within notebook entries) and Blob (raw binary storage) in that they are first-class data catalog items with full metadata and discovery capabilities.

GitHub OpenAPI

Operations 11

POST /file Create File #
GET /file/items List File items #
GET /file/{file_id} Get File by ID #
PATCH /file/{file_id} Update File #
GET /file/{file_id}/versions/items List FileVersion items #
GET /file/{file_id}/versions/{file_version_id} Get FileVersion by ID #
POST /file/{file_id}:revert Revert File to version #
POST /file:batch-create Batch create File #
PATCH /file:batch-update Batch update File #
POST /file:bulk-create Bulk create File #
PATCH /file:bulk-update Bulk update File #

Documentation

📖
Documentation
https://docs.benchling.com/docs/developer-platform-overview
📖
APIReference
https://benchling.com/api/v3/reference
📖
Authentication
https://artifacts.apis.io/benchling/authentication/benchling-authentication.yml
📖
RateLimits
https://artifacts.apis.io/benchling/rate-limits/benchling-rate-limits.yml

Specifications

⚙
OpenAPI
https://artifacts.apis.io/benchling/openapi/benchling-file-api-openapi.yml

Other Resources

🔗
OpenAPIRemote
https://benchling.com/api/v3/openapi.yaml
🔗
Conventions
https://artifacts.apis.io/benchling/conventions/benchling-conventions.yml
🔗
ErrorCatalog
https://artifacts.apis.io/benchling/errors/benchling-problem-types.yml
🔗
DataModel
https://artifacts.apis.io/benchling/data-model/benchling-data-model.yml
🔗
Webhooks
https://artifacts.apis.io/benchling/asyncapi/benchling-webhooks.yml
🔗
Lifecycle
https://artifacts.apis.io/benchling/lifecycle/benchling-lifecycle.yml
🔗
ChangeLog
https://artifacts.apis.io/benchling/changelog/benchling-changelog.yml
🔗
StabilityPolicy
https://docs.benchling.com/docs/stability-guidelines
🔗
SDKs
https://artifacts.apis.io/benchling/packages/benchling-packages.yml

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OpenAPI Specification

benchling-file-api-openapi.yml Raw ↑ 
openapi: 3.2.0
info:
  title: Benchling File API
  version: 2.0.0
  license:
    name: Apache 2.0
    url: http://www.apache.org/licenses/LICENSE-2.0.html
  description: 'Operations tagged File across 2 of this provider''s published API definitions: benchling-openapi.yml, benchling-v3-openapi.yaml. Each path carries the servers of the definition it was published in.'
servers:
- url: /api/v3
security:
- oAuth: []
- basicApiKeyAuth: []
tags:


# --- truncated at 32 KB (36 KB total) ---
# Full source: https://artifacts.apis.io/benchling/openapi/benchling-file-api-openapi.yml